Gene : Bostr.26675s0281 B. stricta v1.2

Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  281
Name:  ? Bostr.26675s0281 Secondary Identifier:  ? PAC:30668430

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0281 0.5kb upstream 0.5kb upstream 3231 true Scaffold26675: 1783275-1786505 Boechera stricta
Bostr.26675s0281 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 1783275-1783774 Boechera stricta
Bostr.26675s0281 0.5kb downstream 0.5kb downstream 3231 true Scaffold26675: 1783775-1787005 Boechera stricta
Bostr.26675s0281 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 1786506-1787005 Boechera stricta
Bostr.26675s0281 1.0kb upstream 1.0kb upstream 3731 true Scaffold26675: 1782775-1786505 Boechera stricta
Bostr.26675s0281 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 1782775-1783774 Boechera stricta
Bostr.26675s0281 1.0kb downstream 1.0kb downstream 3731 true Scaffold26675: 1783775-1787505 Boechera stricta
Bostr.26675s0281 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 1786506-1787505 Boechera stricta
Bostr.26675s0281 2.0kb upstream 2.0kb upstream 4731 true Scaffold26675: 1781775-1786505 Boechera stricta
Bostr.26675s0281 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 1781775-1783774 Boechera stricta
Bostr.26675s0281 2.0kb downstream 2.0kb downstream 4731 true Scaffold26675: 1783775-1788505 Boechera stricta
Bostr.26675s0281 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 1786506-1788505 Boechera stricta
Bostr.26675s0281 5.0kb upstream 5.0kb upstream 7731 true Scaffold26675: 1778775-1786505 Boechera stricta
Bostr.26675s0281 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 1778775-1783774 Boechera stricta
Bostr.26675s0281 5.0kb downstream 5.0kb downstream 7731 true Scaffold26675: 1783775-1791505 Boechera stricta
Bostr.26675s0281 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 1786506-1791505 Boechera stricta
Bostr.26675s0281 10.0kb upstream 10.0kb upstream 12731 true Scaffold26675: 1773775-1786505 Boechera stricta
Bostr.26675s0281 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 1773775-1783774 Boechera stricta
Bostr.26675s0281 10.0kb downstream 10.0kb downstream 12731 true Scaffold26675: 1783775-1796505 Boechera stricta
Bostr.26675s0281 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 1786506-1796505 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030785 5273 Angiosperm View MSA
122341229 5261 Brassicaceae Singleton cluster - no MSA
123781629 5264 Brassicales-Malvales Singleton cluster - no MSA
124279914 5266 SBM Singleton cluster - no MSA
124134828 5268 Malvidae Singleton cluster - no MSA
123862880 5270 Rosid Singleton cluster - no MSA
123448326 5271 Pentapetalae Singleton cluster - no MSA
122483865 5272 Eudicot Singleton cluster - no MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain