Gene : Bostr.26675s0060 B. stricta v1.2
Defline:  (1 of 2) KOG1521 - RNA polymerase I and III, subunit RPA40/RPC40 Genomic Order:  60
Name:  ? Bostr.26675s0060 Secondary Identifier:  ? PAC:30668156
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0060 0.5kb upstream 0.5kb upstream 3531 true Scaffold26675: 369299-372829 Boechera stricta
Bostr.26675s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 369299-369798 Boechera stricta
Bostr.26675s0060 0.5kb downstream 0.5kb downstream 3531 true Scaffold26675: 369799-373329 Boechera stricta
Bostr.26675s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 372830-373329 Boechera stricta
Bostr.26675s0060 1.0kb upstream 1.0kb upstream 4031 true Scaffold26675: 368799-372829 Boechera stricta
Bostr.26675s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 368799-369798 Boechera stricta
Bostr.26675s0060 1.0kb downstream 1.0kb downstream 4031 true Scaffold26675: 369799-373829 Boechera stricta
Bostr.26675s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 372830-373829 Boechera stricta
Bostr.26675s0060 2.0kb upstream 2.0kb upstream 5031 true Scaffold26675: 367799-372829 Boechera stricta
Bostr.26675s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 367799-369798 Boechera stricta
Bostr.26675s0060 2.0kb downstream 2.0kb downstream 5031 true Scaffold26675: 369799-374829 Boechera stricta
Bostr.26675s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 372830-374829 Boechera stricta
Bostr.26675s0060 5.0kb upstream 5.0kb upstream 8031 true Scaffold26675: 364799-372829 Boechera stricta
Bostr.26675s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 364799-369798 Boechera stricta
Bostr.26675s0060 5.0kb downstream 5.0kb downstream 8031 true Scaffold26675: 369799-377829 Boechera stricta
Bostr.26675s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 372830-377829 Boechera stricta
Bostr.26675s0060 10.0kb upstream 10.0kb upstream 13031 true Scaffold26675: 359799-372829 Boechera stricta
Bostr.26675s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 359799-369798 Boechera stricta
Bostr.26675s0060 10.0kb downstream 10.0kb downstream 13031 true Scaffold26675: 369799-382829 Boechera stricta
Bostr.26675s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 372830-382829 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341202 5261 Brassicaceae Singleton cluster - no MSA
123842921 5264 Brassicales-Malvales View MSA
124323866 5266 SBM View MSA
124252519 5268 Malvidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain