Gene : Bostr.26675s0002 B. stricta v1.2
Defline:  (1 of 2) PTHR11851//PTHR11851:SF145 - METALLOPROTEASE Genomic Order:  2
Name:  ? Bostr.26675s0002 Secondary Identifier:  ? PAC:30668168
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0002 0.5kb upstream 0.5kb upstream 4042 true Scaffold26675: 3173-7214 Boechera stricta
Bostr.26675s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 3173-3672 Boechera stricta
Bostr.26675s0002 0.5kb downstream 0.5kb downstream 4042 true Scaffold26675: 3673-7714 Boechera stricta
Bostr.26675s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 7215-7714 Boechera stricta
Bostr.26675s0002 1.0kb upstream 1.0kb upstream 4542 true Scaffold26675: 2673-7214 Boechera stricta
Bostr.26675s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 2673-3672 Boechera stricta
Bostr.26675s0002 1.0kb downstream 1.0kb downstream 4542 true Scaffold26675: 3673-8214 Boechera stricta
Bostr.26675s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 7215-8214 Boechera stricta
Bostr.26675s0002 2.0kb upstream 2.0kb upstream 5542 true Scaffold26675: 1673-7214 Boechera stricta
Bostr.26675s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 1673-3672 Boechera stricta
Bostr.26675s0002 2.0kb downstream 2.0kb downstream 5542 true Scaffold26675: 3673-9214 Boechera stricta
Bostr.26675s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 7215-9214 Boechera stricta
Bostr.26675s0002 5.0kb upstream 5.0kb upstream 7214 true Scaffold26675: 1-7214 Boechera stricta
Bostr.26675s0002 5.0kb upstream 5.0kb upstream 3672 false Scaffold26675: 1-3672 Boechera stricta
Bostr.26675s0002 5.0kb downstream 5.0kb downstream 8542 true Scaffold26675: 3673-12214 Boechera stricta
Bostr.26675s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 7215-12214 Boechera stricta
Bostr.26675s0002 10.0kb upstream 10.0kb upstream 7214 true Scaffold26675: 1-7214 Boechera stricta
Bostr.26675s0002 10.0kb upstream 10.0kb upstream 3672 false Scaffold26675: 1-3672 Boechera stricta
Bostr.26675s0002 10.0kb downstream 10.0kb downstream 13542 true Scaffold26675: 3673-17214 Boechera stricta
Bostr.26675s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 7215-17214 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122370370 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain