Gene : Bostr.26675s0031 B. stricta v1.2
Defline:  (1 of 4) 6.2.1.12 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase Genomic Order:  31
Name:  ? Bostr.26675s0031 Secondary Identifier:  ? PAC:30668194
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1121 Boechera stricta pathologic  
Bstricta PWY1F-FLAVSYN Boechera stricta pathologic  
Bstricta PWY-361 Boechera stricta pathologic  
Bstricta PWY-6435 Boechera stricta pathologic  
Bstricta PWY-6673 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0031 0.5kb upstream 0.5kb upstream 3448 true Scaffold26675: 191663-195110 Boechera stricta
Bostr.26675s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 191663-192162 Boechera stricta
Bostr.26675s0031 0.5kb downstream 0.5kb downstream 3448 true Scaffold26675: 192163-195610 Boechera stricta
Bostr.26675s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 195111-195610 Boechera stricta
Bostr.26675s0031 1.0kb upstream 1.0kb upstream 3948 true Scaffold26675: 191163-195110 Boechera stricta
Bostr.26675s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 191163-192162 Boechera stricta
Bostr.26675s0031 1.0kb downstream 1.0kb downstream 3948 true Scaffold26675: 192163-196110 Boechera stricta
Bostr.26675s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 195111-196110 Boechera stricta
Bostr.26675s0031 2.0kb upstream 2.0kb upstream 4948 true Scaffold26675: 190163-195110 Boechera stricta
Bostr.26675s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 190163-192162 Boechera stricta
Bostr.26675s0031 2.0kb downstream 2.0kb downstream 4948 true Scaffold26675: 192163-197110 Boechera stricta
Bostr.26675s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 195111-197110 Boechera stricta
Bostr.26675s0031 5.0kb upstream 5.0kb upstream 7948 true Scaffold26675: 187163-195110 Boechera stricta
Bostr.26675s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 187163-192162 Boechera stricta
Bostr.26675s0031 5.0kb downstream 5.0kb downstream 7948 true Scaffold26675: 192163-200110 Boechera stricta
Bostr.26675s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 195111-200110 Boechera stricta
Bostr.26675s0031 10.0kb upstream 10.0kb upstream 12948 true Scaffold26675: 182163-195110 Boechera stricta
Bostr.26675s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 182163-192162 Boechera stricta
Bostr.26675s0031 10.0kb downstream 10.0kb downstream 12948 true Scaffold26675: 192163-205110 Boechera stricta
Bostr.26675s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 195111-205110 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380546 5261 Brassicaceae View MSA
123832271 5264 Brassicales-Malvales View MSA
124344401 5266 SBM View MSA
124253701 5268 Malvidae View MSA
124064969 5270 Rosid View MSA
123741286 5271 Pentapetalae View MSA
122790673 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain