Gene : Bostr.26833s0253 B. stricta v1.2
Defline:  (1 of 18) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  253
Name:  ? Bostr.26833s0253 Secondary Identifier:  ? PAC:30653386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0253 0.5kb upstream 0.5kb upstream 2722 true Scaffold26833: 1302537-1305258 Boechera stricta
Bostr.26833s0253 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 1304759-1305258 Boechera stricta
Bostr.26833s0253 0.5kb downstream 0.5kb downstream 2722 true Scaffold26833: 1302037-1304758 Boechera stricta
Bostr.26833s0253 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 1302037-1302536 Boechera stricta
Bostr.26833s0253 1.0kb upstream 1.0kb upstream 3222 true Scaffold26833: 1302537-1305758 Boechera stricta
Bostr.26833s0253 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 1304759-1305758 Boechera stricta
Bostr.26833s0253 1.0kb downstream 1.0kb downstream 3222 true Scaffold26833: 1301537-1304758 Boechera stricta
Bostr.26833s0253 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 1301537-1302536 Boechera stricta
Bostr.26833s0253 2.0kb upstream 2.0kb upstream 4222 true Scaffold26833: 1302537-1306758 Boechera stricta
Bostr.26833s0253 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 1304759-1306758 Boechera stricta
Bostr.26833s0253 2.0kb downstream 2.0kb downstream 4222 true Scaffold26833: 1300537-1304758 Boechera stricta
Bostr.26833s0253 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 1300537-1302536 Boechera stricta
Bostr.26833s0253 5.0kb upstream 5.0kb upstream 7222 true Scaffold26833: 1302537-1309758 Boechera stricta
Bostr.26833s0253 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 1304759-1309758 Boechera stricta
Bostr.26833s0253 5.0kb downstream 5.0kb downstream 7222 true Scaffold26833: 1297537-1304758 Boechera stricta
Bostr.26833s0253 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 1297537-1302536 Boechera stricta
Bostr.26833s0253 10.0kb upstream 10.0kb upstream 12222 true Scaffold26833: 1302537-1314758 Boechera stricta
Bostr.26833s0253 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 1304759-1314758 Boechera stricta
Bostr.26833s0253 10.0kb downstream 10.0kb downstream 12222 true Scaffold26833: 1292537-1304758 Boechera stricta
Bostr.26833s0253 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 1292537-1302536 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365753 5261 Brassicaceae View MSA
123834835 5264 Brassicales-Malvales View MSA
124340755 5266 SBM View MSA
124237699 5268 Malvidae View MSA
124065450 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain