Gene : Bostr.26833s0260 B. stricta v1.2
Defline:  (1 of 2) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  260
Name:  ? Bostr.26833s0260 Secondary Identifier:  ? PAC:30653186
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5080 Boechera stricta pathologic  
Bstricta PWY-6433 Boechera stricta pathologic  
Bstricta PWY-6598 Boechera stricta pathologic  
Bstricta PWY-7036 Boechera stricta pathologic  
Bstricta PWY-7601 Boechera stricta pathologic  
Bstricta PWY-7606 Boechera stricta pathologic  
Bstricta PWY-7619 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0260 0.5kb upstream 0.5kb upstream 2712 true Scaffold26833: 1356406-1359117 Boechera stricta
Bostr.26833s0260 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 1356406-1356905 Boechera stricta
Bostr.26833s0260 0.5kb downstream 0.5kb downstream 2712 true Scaffold26833: 1356906-1359617 Boechera stricta
Bostr.26833s0260 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 1359118-1359617 Boechera stricta
Bostr.26833s0260 1.0kb upstream 1.0kb upstream 3212 true Scaffold26833: 1355906-1359117 Boechera stricta
Bostr.26833s0260 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 1355906-1356905 Boechera stricta
Bostr.26833s0260 1.0kb downstream 1.0kb downstream 3212 true Scaffold26833: 1356906-1360117 Boechera stricta
Bostr.26833s0260 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 1359118-1360117 Boechera stricta
Bostr.26833s0260 2.0kb upstream 2.0kb upstream 4212 true Scaffold26833: 1354906-1359117 Boechera stricta
Bostr.26833s0260 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 1354906-1356905 Boechera stricta
Bostr.26833s0260 2.0kb downstream 2.0kb downstream 4212 true Scaffold26833: 1356906-1361117 Boechera stricta
Bostr.26833s0260 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 1359118-1361117 Boechera stricta
Bostr.26833s0260 5.0kb upstream 5.0kb upstream 7212 true Scaffold26833: 1351906-1359117 Boechera stricta
Bostr.26833s0260 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 1351906-1356905 Boechera stricta
Bostr.26833s0260 5.0kb downstream 5.0kb downstream 7212 true Scaffold26833: 1356906-1364117 Boechera stricta
Bostr.26833s0260 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 1359118-1364117 Boechera stricta
Bostr.26833s0260 10.0kb upstream 10.0kb upstream 12212 true Scaffold26833: 1346906-1359117 Boechera stricta
Bostr.26833s0260 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 1346906-1356905 Boechera stricta
Bostr.26833s0260 10.0kb downstream 10.0kb downstream 12212 true Scaffold26833: 1356906-1369117 Boechera stricta
Bostr.26833s0260 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 1359118-1369117 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367081 5261 Brassicaceae View MSA
123836753 5264 Brassicales-Malvales View MSA
124349665 5266 SBM View MSA
124243174 5268 Malvidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain