Gene : Bostr.26833s0189 B. stricta v1.2
Defline:  (1 of 2) 2.5.1.20 - Rubber cis-polyprenylcistransferase / Rubber transferase Genomic Order:  189
Name:  ? Bostr.26833s0189 Secondary Identifier:  ? PAC:30652571
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5815 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0189 0.5kb upstream 0.5kb upstream 1315 true Scaffold26833: 1009558-1010872 Boechera stricta
Bostr.26833s0189 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 1010373-1010872 Boechera stricta
Bostr.26833s0189 0.5kb downstream 0.5kb downstream 1315 true Scaffold26833: 1009058-1010372 Boechera stricta
Bostr.26833s0189 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 1009058-1009557 Boechera stricta
Bostr.26833s0189 1.0kb upstream 1.0kb upstream 1815 true Scaffold26833: 1009558-1011372 Boechera stricta
Bostr.26833s0189 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 1010373-1011372 Boechera stricta
Bostr.26833s0189 1.0kb downstream 1.0kb downstream 1815 true Scaffold26833: 1008558-1010372 Boechera stricta
Bostr.26833s0189 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 1008558-1009557 Boechera stricta
Bostr.26833s0189 2.0kb upstream 2.0kb upstream 2815 true Scaffold26833: 1009558-1012372 Boechera stricta
Bostr.26833s0189 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 1010373-1012372 Boechera stricta
Bostr.26833s0189 2.0kb downstream 2.0kb downstream 2815 true Scaffold26833: 1007558-1010372 Boechera stricta
Bostr.26833s0189 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 1007558-1009557 Boechera stricta
Bostr.26833s0189 5.0kb upstream 5.0kb upstream 5815 true Scaffold26833: 1009558-1015372 Boechera stricta
Bostr.26833s0189 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 1010373-1015372 Boechera stricta
Bostr.26833s0189 5.0kb downstream 5.0kb downstream 5815 true Scaffold26833: 1004558-1010372 Boechera stricta
Bostr.26833s0189 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 1004558-1009557 Boechera stricta
Bostr.26833s0189 10.0kb upstream 10.0kb upstream 10815 true Scaffold26833: 1009558-1020372 Boechera stricta
Bostr.26833s0189 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 1010373-1020372 Boechera stricta
Bostr.26833s0189 10.0kb downstream 10.0kb downstream 10815 true Scaffold26833: 999558-1010372 Boechera stricta
Bostr.26833s0189 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 999558-1009557 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370926 5261 Brassicaceae View MSA
123839607 5264 Brassicales-Malvales View MSA
124351128 5266 SBM View MSA
124244449 5268 Malvidae View MSA
124070400 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain