Gene : Bostr.13129s0466 B. stricta v1.2
Defline:  (1 of 6) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  466
Name:  ? Bostr.13129s0466 Secondary Identifier:  ? PAC:30673029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5957 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0466 0.5kb upstream 0.5kb upstream 1743 true Scaffold13129: 2157916-2159658 Boechera stricta
Bostr.13129s0466 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 2157916-2158415 Boechera stricta
Bostr.13129s0466 0.5kb downstream 0.5kb downstream 1743 true Scaffold13129: 2158416-2160158 Boechera stricta
Bostr.13129s0466 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 2159659-2160158 Boechera stricta
Bostr.13129s0466 1.0kb upstream 1.0kb upstream 2243 true Scaffold13129: 2157416-2159658 Boechera stricta
Bostr.13129s0466 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 2157416-2158415 Boechera stricta
Bostr.13129s0466 1.0kb downstream 1.0kb downstream 2243 true Scaffold13129: 2158416-2160658 Boechera stricta
Bostr.13129s0466 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 2159659-2160658 Boechera stricta
Bostr.13129s0466 2.0kb upstream 2.0kb upstream 3243 true Scaffold13129: 2156416-2159658 Boechera stricta
Bostr.13129s0466 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 2156416-2158415 Boechera stricta
Bostr.13129s0466 2.0kb downstream 2.0kb downstream 3243 true Scaffold13129: 2158416-2161658 Boechera stricta
Bostr.13129s0466 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 2159659-2161658 Boechera stricta
Bostr.13129s0466 5.0kb upstream 5.0kb upstream 6243 true Scaffold13129: 2153416-2159658 Boechera stricta
Bostr.13129s0466 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 2153416-2158415 Boechera stricta
Bostr.13129s0466 5.0kb downstream 5.0kb downstream 6243 true Scaffold13129: 2158416-2164658 Boechera stricta
Bostr.13129s0466 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 2159659-2164658 Boechera stricta
Bostr.13129s0466 10.0kb upstream 10.0kb upstream 11243 true Scaffold13129: 2148416-2159658 Boechera stricta
Bostr.13129s0466 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 2148416-2158415 Boechera stricta
Bostr.13129s0466 10.0kb downstream 10.0kb downstream 11243 true Scaffold13129: 2158416-2169658 Boechera stricta
Bostr.13129s0466 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 2159659-2169658 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366034 5261 Brassicaceae View MSA
123799093 5264 Brassicales-Malvales View MSA
124296648 5266 SBM View MSA
124148739 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain