Gene : Bostr.13671s0034 B. stricta v1.2
Defline:  (1 of 2) PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN Genomic Order:  34
Name:  ? Bostr.13671s0034 Secondary Identifier:  ? PAC:30670518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0034 0.5kb upstream 0.5kb upstream 1115 true Scaffold13671: 165032-166146 Boechera stricta
Bostr.13671s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 165032-165531 Boechera stricta
Bostr.13671s0034 0.5kb downstream 0.5kb downstream 1115 true Scaffold13671: 165532-166646 Boechera stricta
Bostr.13671s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 166147-166646 Boechera stricta
Bostr.13671s0034 1.0kb upstream 1.0kb upstream 1615 true Scaffold13671: 164532-166146 Boechera stricta
Bostr.13671s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 164532-165531 Boechera stricta
Bostr.13671s0034 1.0kb downstream 1.0kb downstream 1615 true Scaffold13671: 165532-167146 Boechera stricta
Bostr.13671s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 166147-167146 Boechera stricta
Bostr.13671s0034 2.0kb upstream 2.0kb upstream 2615 true Scaffold13671: 163532-166146 Boechera stricta
Bostr.13671s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 163532-165531 Boechera stricta
Bostr.13671s0034 2.0kb downstream 2.0kb downstream 2615 true Scaffold13671: 165532-168146 Boechera stricta
Bostr.13671s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 166147-168146 Boechera stricta
Bostr.13671s0034 5.0kb upstream 5.0kb upstream 5615 true Scaffold13671: 160532-166146 Boechera stricta
Bostr.13671s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 160532-165531 Boechera stricta
Bostr.13671s0034 5.0kb downstream 5.0kb downstream 5615 true Scaffold13671: 165532-171146 Boechera stricta
Bostr.13671s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 166147-171146 Boechera stricta
Bostr.13671s0034 10.0kb upstream 10.0kb upstream 10615 true Scaffold13671: 155532-166146 Boechera stricta
Bostr.13671s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 155532-165531 Boechera stricta
Bostr.13671s0034 10.0kb downstream 10.0kb downstream 10615 true Scaffold13671: 165532-176146 Boechera stricta
Bostr.13671s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 166147-176146 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370978 5261 Brassicaceae View MSA
123837934 5264 Brassicales-Malvales View MSA
124337851 5266 SBM View MSA
124240205 5268 Malvidae View MSA
124061034 5270 Rosid View MSA
123749515 5271 Pentapetalae View MSA
122792844 5272 Eudicot View MSA
122052093 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121312953 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain