Gene : Bostr.14452s0002 B. stricta v1.2
Defline:  (1 of 1) PTHR22773:SF40 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 Genomic Order:  2
Name:  ? Bostr.14452s0002 Secondary Identifier:  ? PAC:30664611
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-4302 Boechera stricta pathologic  
Bstricta PWY-5083 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14452s0002 0.5kb upstream 0.5kb upstream 1265 true Scaffold14452: 4197-5461 Boechera stricta
Bostr.14452s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14452: 4197-4696 Boechera stricta
Bostr.14452s0002 0.5kb downstream 0.5kb downstream 1265 true Scaffold14452: 4697-5961 Boechera stricta
Bostr.14452s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14452: 5462-5961 Boechera stricta
Bostr.14452s0002 1.0kb upstream 1.0kb upstream 1765 true Scaffold14452: 3697-5461 Boechera stricta
Bostr.14452s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14452: 3697-4696 Boechera stricta
Bostr.14452s0002 1.0kb downstream 1.0kb downstream 1765 true Scaffold14452: 4697-6461 Boechera stricta
Bostr.14452s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14452: 5462-6461 Boechera stricta
Bostr.14452s0002 2.0kb upstream 2.0kb upstream 2765 true Scaffold14452: 2697-5461 Boechera stricta
Bostr.14452s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14452: 2697-4696 Boechera stricta
Bostr.14452s0002 2.0kb downstream 2.0kb downstream 2765 true Scaffold14452: 4697-7461 Boechera stricta
Bostr.14452s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14452: 5462-7461 Boechera stricta
Bostr.14452s0002 5.0kb upstream 5.0kb upstream 5461 true Scaffold14452: 1-5461 Boechera stricta
Bostr.14452s0002 5.0kb upstream 5.0kb upstream 4696 false Scaffold14452: 1-4696 Boechera stricta
Bostr.14452s0002 5.0kb downstream 5.0kb downstream 5765 true Scaffold14452: 4697-10461 Boechera stricta
Bostr.14452s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold14452: 5462-10461 Boechera stricta
Bostr.14452s0002 10.0kb upstream 10.0kb upstream 5461 true Scaffold14452: 1-5461 Boechera stricta
Bostr.14452s0002 10.0kb upstream 10.0kb upstream 4696 false Scaffold14452: 1-4696 Boechera stricta
Bostr.14452s0002 10.0kb downstream 10.0kb downstream 10457 true Scaffold14452: 4697-15153 Boechera stricta
Bostr.14452s0002 10.0kb downstream 10.0kb downstream 9692 false Scaffold14452: 5462-15153 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122340746 5261 Brassicaceae Singleton cluster - no MSA
123781171 5264 Brassicales-Malvales Singleton cluster - no MSA
124350497 5266 SBM View MSA
124252057 5268 Malvidae View MSA
124074120 5270 Rosid View MSA
123751284 5271 Pentapetalae View MSA
122795690 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain