Gene : Bostr.14866s0003 B. stricta v1.2
Defline:  (1 of 1) PTHR10422 - CYTOCHROME C OXIDASE SUBUNIT 1 Genomic Order:  3
Name:  ? Bostr.14866s0003 Secondary Identifier:  ? PAC:30666315
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14866s0003 0.5kb upstream 0.5kb upstream 2084 true Scaffold14866: 27822-29905 Boechera stricta
Bostr.14866s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold14866: 29406-29905 Boechera stricta
Bostr.14866s0003 0.5kb downstream 0.5kb downstream 2084 true Scaffold14866: 27322-29405 Boechera stricta
Bostr.14866s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold14866: 27322-27821 Boechera stricta
Bostr.14866s0003 1.0kb upstream 1.0kb upstream 2584 true Scaffold14866: 27822-30405 Boechera stricta
Bostr.14866s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold14866: 29406-30405 Boechera stricta
Bostr.14866s0003 1.0kb downstream 1.0kb downstream 2584 true Scaffold14866: 26822-29405 Boechera stricta
Bostr.14866s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold14866: 26822-27821 Boechera stricta
Bostr.14866s0003 2.0kb upstream 2.0kb upstream 3584 true Scaffold14866: 27822-31405 Boechera stricta
Bostr.14866s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold14866: 29406-31405 Boechera stricta
Bostr.14866s0003 2.0kb downstream 2.0kb downstream 3584 true Scaffold14866: 25822-29405 Boechera stricta
Bostr.14866s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold14866: 25822-27821 Boechera stricta
Bostr.14866s0003 5.0kb upstream 5.0kb upstream 6584 true Scaffold14866: 27822-34405 Boechera stricta
Bostr.14866s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold14866: 29406-34405 Boechera stricta
Bostr.14866s0003 5.0kb downstream 5.0kb downstream 6584 true Scaffold14866: 22822-29405 Boechera stricta
Bostr.14866s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold14866: 22822-27821 Boechera stricta
Bostr.14866s0003 10.0kb upstream 10.0kb upstream 11584 true Scaffold14866: 27822-39405 Boechera stricta
Bostr.14866s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold14866: 29406-39405 Boechera stricta
Bostr.14866s0003 10.0kb downstream 10.0kb downstream 11584 true Scaffold14866: 17822-29405 Boechera stricta
Bostr.14866s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold14866: 17822-27821 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026781 5273 Angiosperm View MSA
122378246 5261 Brassicaceae View MSA
123837244 5264 Brassicales-Malvales View MSA
124322268 5266 SBM View MSA
124247775 5268 Malvidae View MSA
123952190 5270 Rosid View MSA
123750940 5271 Pentapetalae View MSA
122794080 5272 Eudicot View MSA
121348518 5274 Embryophyte View MSA
123380893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain