Gene : Bostr.18351s0223 B. stricta v1.2
Defline:  (1 of 2) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  223
Name:  ? Bostr.18351s0223 Secondary Identifier:  ? PAC:30676765
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta SER-GLYSYN-PWY Boechera stricta pathologic  
Bstricta SERSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0223 0.5kb upstream 0.5kb upstream 1769 true Scaffold18351: 1924305-1926073 Boechera stricta
Bostr.18351s0223 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 1924305-1924804 Boechera stricta
Bostr.18351s0223 0.5kb downstream 0.5kb downstream 1769 true Scaffold18351: 1924805-1926573 Boechera stricta
Bostr.18351s0223 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 1926074-1926573 Boechera stricta
Bostr.18351s0223 1.0kb upstream 1.0kb upstream 2269 true Scaffold18351: 1923805-1926073 Boechera stricta
Bostr.18351s0223 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 1923805-1924804 Boechera stricta
Bostr.18351s0223 1.0kb downstream 1.0kb downstream 2269 true Scaffold18351: 1924805-1927073 Boechera stricta
Bostr.18351s0223 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 1926074-1927073 Boechera stricta
Bostr.18351s0223 2.0kb upstream 2.0kb upstream 3269 true Scaffold18351: 1922805-1926073 Boechera stricta
Bostr.18351s0223 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 1922805-1924804 Boechera stricta
Bostr.18351s0223 2.0kb downstream 2.0kb downstream 3269 true Scaffold18351: 1924805-1928073 Boechera stricta
Bostr.18351s0223 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 1926074-1928073 Boechera stricta
Bostr.18351s0223 5.0kb upstream 5.0kb upstream 6269 true Scaffold18351: 1919805-1926073 Boechera stricta
Bostr.18351s0223 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 1919805-1924804 Boechera stricta
Bostr.18351s0223 5.0kb downstream 5.0kb downstream 6269 true Scaffold18351: 1924805-1931073 Boechera stricta
Bostr.18351s0223 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 1926074-1931073 Boechera stricta
Bostr.18351s0223 10.0kb upstream 10.0kb upstream 11269 true Scaffold18351: 1914805-1926073 Boechera stricta
Bostr.18351s0223 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 1914805-1924804 Boechera stricta
Bostr.18351s0223 10.0kb downstream 10.0kb downstream 11269 true Scaffold18351: 1924805-1936073 Boechera stricta
Bostr.18351s0223 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 1926074-1936073 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375973 5261 Brassicaceae View MSA
123837676 5264 Brassicales-Malvales View MSA
124340133 5266 SBM View MSA
124237926 5268 Malvidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain