Gene : Bostr.22157s0060 B. stricta v1.2
Defline:  (1 of 1) PTHR31080:SF8 - F23N19.12 Genomic Order:  60
Name:  ? Bostr.22157s0060 Secondary Identifier:  ? PAC:30653929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22157s0060 0.5kb upstream 0.5kb upstream 1591 true Scaffold22157: 347410-349000 Boechera stricta
Bostr.22157s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold22157: 347410-347909 Boechera stricta
Bostr.22157s0060 0.5kb downstream 0.5kb downstream 1591 true Scaffold22157: 347910-349500 Boechera stricta
Bostr.22157s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold22157: 349001-349500 Boechera stricta
Bostr.22157s0060 1.0kb upstream 1.0kb upstream 2091 true Scaffold22157: 346910-349000 Boechera stricta
Bostr.22157s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold22157: 346910-347909 Boechera stricta
Bostr.22157s0060 1.0kb downstream 1.0kb downstream 2091 true Scaffold22157: 347910-350000 Boechera stricta
Bostr.22157s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold22157: 349001-350000 Boechera stricta
Bostr.22157s0060 2.0kb upstream 2.0kb upstream 3091 true Scaffold22157: 345910-349000 Boechera stricta
Bostr.22157s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold22157: 345910-347909 Boechera stricta
Bostr.22157s0060 2.0kb downstream 2.0kb downstream 3091 true Scaffold22157: 347910-351000 Boechera stricta
Bostr.22157s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold22157: 349001-351000 Boechera stricta
Bostr.22157s0060 5.0kb upstream 5.0kb upstream 6091 true Scaffold22157: 342910-349000 Boechera stricta
Bostr.22157s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold22157: 342910-347909 Boechera stricta
Bostr.22157s0060 5.0kb downstream 5.0kb downstream 6091 true Scaffold22157: 347910-354000 Boechera stricta
Bostr.22157s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold22157: 349001-354000 Boechera stricta
Bostr.22157s0060 10.0kb upstream 10.0kb upstream 11091 true Scaffold22157: 337910-349000 Boechera stricta
Bostr.22157s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold22157: 337910-347909 Boechera stricta
Bostr.22157s0060 10.0kb downstream 10.0kb downstream 11091 true Scaffold22157: 347910-359000 Boechera stricta
Bostr.22157s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold22157: 349001-359000 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343319 5261 Brassicaceae View MSA
123783558 5264 Brassicales-Malvales View MSA
124281783 5266 SBM View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain