Gene : Bostr.23794s0742 B. stricta v1.2

Defline:  (1 of 1) PTHR27001:SF183 - PROTEIN LYK5 Genomic Order:  742
Name:  ? Bostr.23794s0742 Secondary Identifier:  ? PAC:30650993

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0742 0.5kb upstream 0.5kb upstream 2794 true Scaffold23794: 4167470-4170263 Boechera stricta
Bostr.23794s0742 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 4167470-4167969 Boechera stricta
Bostr.23794s0742 0.5kb downstream 0.5kb downstream 2794 true Scaffold23794: 4167970-4170763 Boechera stricta
Bostr.23794s0742 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 4170264-4170763 Boechera stricta
Bostr.23794s0742 1.0kb upstream 1.0kb upstream 3294 true Scaffold23794: 4166970-4170263 Boechera stricta
Bostr.23794s0742 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 4166970-4167969 Boechera stricta
Bostr.23794s0742 1.0kb downstream 1.0kb downstream 3294 true Scaffold23794: 4167970-4171263 Boechera stricta
Bostr.23794s0742 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 4170264-4171263 Boechera stricta
Bostr.23794s0742 2.0kb upstream 2.0kb upstream 4294 true Scaffold23794: 4165970-4170263 Boechera stricta
Bostr.23794s0742 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 4165970-4167969 Boechera stricta
Bostr.23794s0742 2.0kb downstream 2.0kb downstream 4294 true Scaffold23794: 4167970-4172263 Boechera stricta
Bostr.23794s0742 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 4170264-4172263 Boechera stricta
Bostr.23794s0742 5.0kb upstream 5.0kb upstream 7294 true Scaffold23794: 4162970-4170263 Boechera stricta
Bostr.23794s0742 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 4162970-4167969 Boechera stricta
Bostr.23794s0742 5.0kb downstream 5.0kb downstream 7294 true Scaffold23794: 4167970-4175263 Boechera stricta
Bostr.23794s0742 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 4170264-4175263 Boechera stricta
Bostr.23794s0742 10.0kb upstream 10.0kb upstream 12294 true Scaffold23794: 4157970-4170263 Boechera stricta
Bostr.23794s0742 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 4157970-4167969 Boechera stricta
Bostr.23794s0742 10.0kb downstream 10.0kb downstream 12294 true Scaffold23794: 4167970-4180263 Boechera stricta
Bostr.23794s0742 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 4170264-4180263 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372921 5261 Brassicaceae View MSA
123833856 5264 Brassicales-Malvales View MSA
124341912 5266 SBM View MSA
124238350 5268 Malvidae View MSA
124073020 5270 Rosid View MSA
123753390 5271 Pentapetalae View MSA
122790580 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain