Gene : Bostr.25542s0140 B. stricta v1.2
Defline:  (1 of 182) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  140
Name:  ? Bostr.25542s0140 Secondary Identifier:  ? PAC:30672340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0140 0.5kb upstream 0.5kb upstream 3489 true Scaffold25542: 625611-629099 Boechera stricta
Bostr.25542s0140 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 628600-629099 Boechera stricta
Bostr.25542s0140 0.5kb downstream 0.5kb downstream 3489 true Scaffold25542: 625111-628599 Boechera stricta
Bostr.25542s0140 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 625111-625610 Boechera stricta
Bostr.25542s0140 1.0kb upstream 1.0kb upstream 3989 true Scaffold25542: 625611-629599 Boechera stricta
Bostr.25542s0140 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 628600-629599 Boechera stricta
Bostr.25542s0140 1.0kb downstream 1.0kb downstream 3989 true Scaffold25542: 624611-628599 Boechera stricta
Bostr.25542s0140 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 624611-625610 Boechera stricta
Bostr.25542s0140 2.0kb upstream 2.0kb upstream 4989 true Scaffold25542: 625611-630599 Boechera stricta
Bostr.25542s0140 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 628600-630599 Boechera stricta
Bostr.25542s0140 2.0kb downstream 2.0kb downstream 4989 true Scaffold25542: 623611-628599 Boechera stricta
Bostr.25542s0140 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 623611-625610 Boechera stricta
Bostr.25542s0140 5.0kb upstream 5.0kb upstream 7989 true Scaffold25542: 625611-633599 Boechera stricta
Bostr.25542s0140 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 628600-633599 Boechera stricta
Bostr.25542s0140 5.0kb downstream 5.0kb downstream 7989 true Scaffold25542: 620611-628599 Boechera stricta
Bostr.25542s0140 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 620611-625610 Boechera stricta
Bostr.25542s0140 10.0kb upstream 10.0kb upstream 12989 true Scaffold25542: 625611-638599 Boechera stricta
Bostr.25542s0140 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 628600-638599 Boechera stricta
Bostr.25542s0140 10.0kb downstream 10.0kb downstream 12989 true Scaffold25542: 615611-628599 Boechera stricta
Bostr.25542s0140 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 615611-625610 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374652 5261 Brassicaceae View MSA
123828770 5264 Brassicales-Malvales View MSA
124338071 5266 SBM View MSA
124246934 5268 Malvidae View MSA
124061137 5270 Rosid View MSA
123742346 5271 Pentapetalae View MSA
122794962 5272 Eudicot View MSA
122044957 5273 Angiosperm View MSA
121352585 5274 Embryophyte View MSA
123382887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain