Gene : Bostr.25993s0300 B. stricta v1.2

Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  300
Name:  ? Bostr.25993s0300 Secondary Identifier:  ? PAC:30668000

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0300 0.5kb upstream 0.5kb upstream 2170 true Scaffold25993: 1485473-1487642 Boechera stricta
Bostr.25993s0300 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1485473-1485972 Boechera stricta
Bostr.25993s0300 0.5kb downstream 0.5kb downstream 2170 true Scaffold25993: 1485973-1488142 Boechera stricta
Bostr.25993s0300 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1487643-1488142 Boechera stricta
Bostr.25993s0300 1.0kb upstream 1.0kb upstream 2670 true Scaffold25993: 1484973-1487642 Boechera stricta
Bostr.25993s0300 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1484973-1485972 Boechera stricta
Bostr.25993s0300 1.0kb downstream 1.0kb downstream 2670 true Scaffold25993: 1485973-1488642 Boechera stricta
Bostr.25993s0300 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1487643-1488642 Boechera stricta
Bostr.25993s0300 2.0kb upstream 2.0kb upstream 3670 true Scaffold25993: 1483973-1487642 Boechera stricta
Bostr.25993s0300 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1483973-1485972 Boechera stricta
Bostr.25993s0300 2.0kb downstream 2.0kb downstream 3670 true Scaffold25993: 1485973-1489642 Boechera stricta
Bostr.25993s0300 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1487643-1489642 Boechera stricta
Bostr.25993s0300 5.0kb upstream 5.0kb upstream 6670 true Scaffold25993: 1480973-1487642 Boechera stricta
Bostr.25993s0300 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1480973-1485972 Boechera stricta
Bostr.25993s0300 5.0kb downstream 5.0kb downstream 6670 true Scaffold25993: 1485973-1492642 Boechera stricta
Bostr.25993s0300 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1487643-1492642 Boechera stricta
Bostr.25993s0300 10.0kb upstream 10.0kb upstream 11670 true Scaffold25993: 1475973-1487642 Boechera stricta
Bostr.25993s0300 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1475973-1485972 Boechera stricta
Bostr.25993s0300 10.0kb downstream 10.0kb downstream 11670 true Scaffold25993: 1485973-1497642 Boechera stricta
Bostr.25993s0300 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1487643-1497642 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370961 5261 Brassicaceae View MSA
123830764 5264 Brassicales-Malvales View MSA
124339418 5266 SBM View MSA
124251830 5268 Malvidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain