Gene : Bostr.25993s0548 B. stricta v1.2
Defline:  (1 of 2) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  548
Name:  ? Bostr.25993s0548 Secondary Identifier:  ? PAC:30667394
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-4302 Boechera stricta pathologic  
Bstricta PWY-5083 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0548 0.5kb upstream 0.5kb upstream 1123 true Scaffold25993: 2694304-2695426 Boechera stricta
Bostr.25993s0548 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2694927-2695426 Boechera stricta
Bostr.25993s0548 0.5kb downstream 0.5kb downstream 1123 true Scaffold25993: 2693804-2694926 Boechera stricta
Bostr.25993s0548 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2693804-2694303 Boechera stricta
Bostr.25993s0548 1.0kb upstream 1.0kb upstream 1623 true Scaffold25993: 2694304-2695926 Boechera stricta
Bostr.25993s0548 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2694927-2695926 Boechera stricta
Bostr.25993s0548 1.0kb downstream 1.0kb downstream 1623 true Scaffold25993: 2693304-2694926 Boechera stricta
Bostr.25993s0548 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2693304-2694303 Boechera stricta
Bostr.25993s0548 2.0kb upstream 2.0kb upstream 2623 true Scaffold25993: 2694304-2696926 Boechera stricta
Bostr.25993s0548 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2694927-2696926 Boechera stricta
Bostr.25993s0548 2.0kb downstream 2.0kb downstream 2623 true Scaffold25993: 2692304-2694926 Boechera stricta
Bostr.25993s0548 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2692304-2694303 Boechera stricta
Bostr.25993s0548 5.0kb upstream 5.0kb upstream 5623 true Scaffold25993: 2694304-2699926 Boechera stricta
Bostr.25993s0548 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2694927-2699926 Boechera stricta
Bostr.25993s0548 5.0kb downstream 5.0kb downstream 5623 true Scaffold25993: 2689304-2694926 Boechera stricta
Bostr.25993s0548 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2689304-2694303 Boechera stricta
Bostr.25993s0548 10.0kb upstream 10.0kb upstream 10623 true Scaffold25993: 2694304-2704926 Boechera stricta
Bostr.25993s0548 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2694927-2704926 Boechera stricta
Bostr.25993s0548 10.0kb downstream 10.0kb downstream 10623 true Scaffold25993: 2684304-2694926 Boechera stricta
Bostr.25993s0548 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2684304-2694303 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369748 5261 Brassicaceae View MSA
123840771 5264 Brassicales-Malvales View MSA
124322782 5266 SBM View MSA
124253115 5268 Malvidae View MSA
124061504 5270 Rosid View MSA
123740259 5271 Pentapetalae View MSA
122791906 5272 Eudicot View MSA
122042658 5273 Angiosperm View MSA
121346631 5274 Embryophyte View MSA
123428408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain