Gene : Bostr.26833s0076 B. stricta v1.2

Defline:  (1 of 143) PF00847 - AP2 domain (AP2) Genomic Order:  76
Name:  ? Bostr.26833s0076 Secondary Identifier:  ? PAC:30653569

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0076 0.5kb upstream 0.5kb upstream 1560 true Scaffold26833: 437821-439380 Boechera stricta
Bostr.26833s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 437821-438320 Boechera stricta
Bostr.26833s0076 0.5kb downstream 0.5kb downstream 1560 true Scaffold26833: 438321-439880 Boechera stricta
Bostr.26833s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 439381-439880 Boechera stricta
Bostr.26833s0076 1.0kb upstream 1.0kb upstream 2060 true Scaffold26833: 437321-439380 Boechera stricta
Bostr.26833s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 437321-438320 Boechera stricta
Bostr.26833s0076 1.0kb downstream 1.0kb downstream 2060 true Scaffold26833: 438321-440380 Boechera stricta
Bostr.26833s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 439381-440380 Boechera stricta
Bostr.26833s0076 2.0kb upstream 2.0kb upstream 3060 true Scaffold26833: 436321-439380 Boechera stricta
Bostr.26833s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 436321-438320 Boechera stricta
Bostr.26833s0076 2.0kb downstream 2.0kb downstream 3060 true Scaffold26833: 438321-441380 Boechera stricta
Bostr.26833s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 439381-441380 Boechera stricta
Bostr.26833s0076 5.0kb upstream 5.0kb upstream 6060 true Scaffold26833: 433321-439380 Boechera stricta
Bostr.26833s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 433321-438320 Boechera stricta
Bostr.26833s0076 5.0kb downstream 5.0kb downstream 6060 true Scaffold26833: 438321-444380 Boechera stricta
Bostr.26833s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 439381-444380 Boechera stricta
Bostr.26833s0076 10.0kb upstream 10.0kb upstream 11060 true Scaffold26833: 428321-439380 Boechera stricta
Bostr.26833s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 428321-438320 Boechera stricta
Bostr.26833s0076 10.0kb downstream 10.0kb downstream 11060 true Scaffold26833: 438321-449380 Boechera stricta
Bostr.26833s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 439381-449380 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369757 5261 Brassicaceae View MSA
123837459 5264 Brassicales-Malvales View MSA
124350301 5266 SBM View MSA
124248805 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain