Gene : Cucsa.336830 C. sativus v1.0
Defline:  (1 of 1) PTHR19376:SF11 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1 Genomic Order:  1
Name:  ? Cucsa.336830 Secondary Identifier:  ? PAC:16978509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.336830 0.5kb upstream 0.5kb upstream 18297 true scaffold03356: 250-18546 Cucumis sativus
Cucsa.336830 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 18047-18546 Cucumis sativus
Cucsa.336830 0.5kb downstream 0.5kb downstream 18046 true scaffold03356: 1-18046 Cucumis sativus
Cucsa.336830 0.5kb downstream 0.5kb downstream 249 false scaffold03356: 1-249 Cucumis sativus
Cucsa.336830 1.0kb upstream 1.0kb upstream 18797 true scaffold03356: 250-19046 Cucumis sativus
Cucsa.336830 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 18047-19046 Cucumis sativus
Cucsa.336830 1.0kb downstream 1.0kb downstream 18046 true scaffold03356: 1-18046 Cucumis sativus
Cucsa.336830 1.0kb downstream 1.0kb downstream 249 false scaffold03356: 1-249 Cucumis sativus
Cucsa.336830 2.0kb upstream 2.0kb upstream 19797 true scaffold03356: 250-20046 Cucumis sativus
Cucsa.336830 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 18047-20046 Cucumis sativus
Cucsa.336830 2.0kb downstream 2.0kb downstream 18046 true scaffold03356: 1-18046 Cucumis sativus
Cucsa.336830 2.0kb downstream 2.0kb downstream 249 false scaffold03356: 1-249 Cucumis sativus
Cucsa.336830 5.0kb upstream 5.0kb upstream 22797 true scaffold03356: 250-23046 Cucumis sativus
Cucsa.336830 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 18047-23046 Cucumis sativus
Cucsa.336830 5.0kb downstream 5.0kb downstream 18046 true scaffold03356: 1-18046 Cucumis sativus
Cucsa.336830 5.0kb downstream 5.0kb downstream 249 false scaffold03356: 1-249 Cucumis sativus
Cucsa.336830 10.0kb upstream 10.0kb upstream 27797 true scaffold03356: 250-28046 Cucumis sativus
Cucsa.336830 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 18047-28046 Cucumis sativus
Cucsa.336830 10.0kb downstream 10.0kb downstream 18046 true scaffold03356: 1-18046 Cucumis sativus
Cucsa.336830 10.0kb downstream 10.0kb downstream 249 false scaffold03356: 1-249 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308558 5265 Fabidae View MSA
124068682 5270 Rosid View MSA
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain