Gene : Cucsa.330820 C. sativus v1.0
Defline:  (1 of 5) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  1
Name:  ? Cucsa.330820 Secondary Identifier:  ? PAC:16978216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.330820 0.5kb upstream 0.5kb upstream 1206 true scaffold03227: 1-1206 Cucumis sativus
Cucsa.330820 0.5kb upstream 0.5kb upstream 331 false scaffold03227: 1-331 Cucumis sativus
Cucsa.330820 0.5kb downstream 0.5kb downstream 1375 true scaffold03227: 332-1706 Cucumis sativus
Cucsa.330820 0.5kb downstream 0.5kb downstream 500 false scaffold03227: 1207-1706 Cucumis sativus
Cucsa.330820 1.0kb upstream 1.0kb upstream 1206 true scaffold03227: 1-1206 Cucumis sativus
Cucsa.330820 1.0kb upstream 1.0kb upstream 331 false scaffold03227: 1-331 Cucumis sativus
Cucsa.330820 1.0kb downstream 1.0kb downstream 1796 true scaffold03227: 332-2127 Cucumis sativus
Cucsa.330820 1.0kb downstream 1.0kb downstream 921 false scaffold03227: 1207-2127 Cucumis sativus
Cucsa.330820 2.0kb upstream 2.0kb upstream 1206 true scaffold03227: 1-1206 Cucumis sativus
Cucsa.330820 2.0kb upstream 2.0kb upstream 331 false scaffold03227: 1-331 Cucumis sativus
Cucsa.330820 2.0kb downstream 2.0kb downstream 1796 true scaffold03227: 332-2127 Cucumis sativus
Cucsa.330820 2.0kb downstream 2.0kb downstream 921 false scaffold03227: 1207-2127 Cucumis sativus
Cucsa.330820 5.0kb upstream 5.0kb upstream 1206 true scaffold03227: 1-1206 Cucumis sativus
Cucsa.330820 5.0kb upstream 5.0kb upstream 331 false scaffold03227: 1-331 Cucumis sativus
Cucsa.330820 5.0kb downstream 5.0kb downstream 1796 true scaffold03227: 332-2127 Cucumis sativus
Cucsa.330820 5.0kb downstream 5.0kb downstream 921 false scaffold03227: 1207-2127 Cucumis sativus
Cucsa.330820 10.0kb upstream 10.0kb upstream 1206 true scaffold03227: 1-1206 Cucumis sativus
Cucsa.330820 10.0kb upstream 10.0kb upstream 331 false scaffold03227: 1-331 Cucumis sativus
Cucsa.330820 10.0kb downstream 10.0kb downstream 1796 true scaffold03227: 332-2127 Cucumis sativus
Cucsa.330820 10.0kb downstream 10.0kb downstream 921 false scaffold03227: 1207-2127 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606515 5273 Angiosperm View MSA
122236785 5265 Fabidae View MSA
123982995 5270 Rosid View MSA
123558669 5271 Pentapetalae View MSA
122593483 5272 Eudicot View MSA
120878805 5274 Embryophyte View MSA
122919694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain