Gene : Cucsa.322390 C. sativus v1.0
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  228
Name:  ? Cucsa.322390 Secondary Identifier:  ? PAC:16977752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.322390 0.5kb upstream 0.5kb upstream 890 true scaffold03080: 2152841-2153730 Cucumis sativus
Cucsa.322390 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 2152841-2153340 Cucumis sativus
Cucsa.322390 0.5kb downstream 0.5kb downstream 890 true scaffold03080: 2153341-2154230 Cucumis sativus
Cucsa.322390 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 2153731-2154230 Cucumis sativus
Cucsa.322390 1.0kb upstream 1.0kb upstream 1390 true scaffold03080: 2152341-2153730 Cucumis sativus
Cucsa.322390 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 2152341-2153340 Cucumis sativus
Cucsa.322390 1.0kb downstream 1.0kb downstream 1390 true scaffold03080: 2153341-2154730 Cucumis sativus
Cucsa.322390 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 2153731-2154730 Cucumis sativus
Cucsa.322390 2.0kb upstream 2.0kb upstream 2390 true scaffold03080: 2151341-2153730 Cucumis sativus
Cucsa.322390 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 2151341-2153340 Cucumis sativus
Cucsa.322390 2.0kb downstream 2.0kb downstream 2390 true scaffold03080: 2153341-2155730 Cucumis sativus
Cucsa.322390 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 2153731-2155730 Cucumis sativus
Cucsa.322390 5.0kb upstream 5.0kb upstream 5390 true scaffold03080: 2148341-2153730 Cucumis sativus
Cucsa.322390 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 2148341-2153340 Cucumis sativus
Cucsa.322390 5.0kb downstream 5.0kb downstream 5390 true scaffold03080: 2153341-2158730 Cucumis sativus
Cucsa.322390 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 2153731-2158730 Cucumis sativus
Cucsa.322390 10.0kb upstream 10.0kb upstream 10390 true scaffold03080: 2143341-2153730 Cucumis sativus
Cucsa.322390 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 2143341-2153340 Cucumis sativus
Cucsa.322390 10.0kb downstream 10.0kb downstream 10390 true scaffold03080: 2153341-2163730 Cucumis sativus
Cucsa.322390 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 2153731-2163730 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605429 5273 Angiosperm Singleton cluster - no MSA
122235694 5265 Fabidae Singleton cluster - no MSA
123981908 5270 Rosid Singleton cluster - no MSA
123557583 5271 Pentapetalae Singleton cluster - no MSA
122592397 5272 Eudicot Singleton cluster - no MSA
120877719 5274 Embryophyte Singleton cluster - no MSA
122918608 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain