Gene : Cucsa.322550 C. sativus v1.0
Defline:  (1 of 1) KOG3046 - Transcription factor, subunit of SRB subcomplex of RNA polymerase II Genomic Order:  244
Name:  ? Cucsa.322550 Secondary Identifier:  ? PAC:16977784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.322550 0.5kb upstream 0.5kb upstream 5184 true scaffold03080: 2273714-2278897 Cucumis sativus
Cucsa.322550 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 2273714-2274213 Cucumis sativus
Cucsa.322550 0.5kb downstream 0.5kb downstream 5184 true scaffold03080: 2274214-2279397 Cucumis sativus
Cucsa.322550 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 2278898-2279397 Cucumis sativus
Cucsa.322550 1.0kb upstream 1.0kb upstream 5684 true scaffold03080: 2273214-2278897 Cucumis sativus
Cucsa.322550 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 2273214-2274213 Cucumis sativus
Cucsa.322550 1.0kb downstream 1.0kb downstream 5684 true scaffold03080: 2274214-2279897 Cucumis sativus
Cucsa.322550 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 2278898-2279897 Cucumis sativus
Cucsa.322550 2.0kb upstream 2.0kb upstream 6684 true scaffold03080: 2272214-2278897 Cucumis sativus
Cucsa.322550 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 2272214-2274213 Cucumis sativus
Cucsa.322550 2.0kb downstream 2.0kb downstream 6684 true scaffold03080: 2274214-2280897 Cucumis sativus
Cucsa.322550 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 2278898-2280897 Cucumis sativus
Cucsa.322550 5.0kb upstream 5.0kb upstream 9684 true scaffold03080: 2269214-2278897 Cucumis sativus
Cucsa.322550 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 2269214-2274213 Cucumis sativus
Cucsa.322550 5.0kb downstream 5.0kb downstream 9684 true scaffold03080: 2274214-2283897 Cucumis sativus
Cucsa.322550 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 2278898-2283897 Cucumis sativus
Cucsa.322550 10.0kb upstream 10.0kb upstream 14684 true scaffold03080: 2264214-2278897 Cucumis sativus
Cucsa.322550 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 2264214-2274213 Cucumis sativus
Cucsa.322550 10.0kb downstream 10.0kb downstream 14684 true scaffold03080: 2274214-2288897 Cucumis sativus
Cucsa.322550 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 2278898-2288897 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301301 5265 Fabidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain