Gene : Cucsa.339180 C. sativus v1.0
Defline:  (1 of 5) PTHR23070:SF5 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  236
Name:  ? Cucsa.339180 Secondary Identifier:  ? PAC:16978841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.339180 0.5kb upstream 0.5kb upstream 2113 true scaffold03356: 1887190-1889302 Cucumis sativus
Cucsa.339180 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 1887190-1887689 Cucumis sativus
Cucsa.339180 0.5kb downstream 0.5kb downstream 2113 true scaffold03356: 1887690-1889802 Cucumis sativus
Cucsa.339180 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 1889303-1889802 Cucumis sativus
Cucsa.339180 1.0kb upstream 1.0kb upstream 2613 true scaffold03356: 1886690-1889302 Cucumis sativus
Cucsa.339180 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 1886690-1887689 Cucumis sativus
Cucsa.339180 1.0kb downstream 1.0kb downstream 2613 true scaffold03356: 1887690-1890302 Cucumis sativus
Cucsa.339180 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 1889303-1890302 Cucumis sativus
Cucsa.339180 2.0kb upstream 2.0kb upstream 3613 true scaffold03356: 1885690-1889302 Cucumis sativus
Cucsa.339180 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 1885690-1887689 Cucumis sativus
Cucsa.339180 2.0kb downstream 2.0kb downstream 3613 true scaffold03356: 1887690-1891302 Cucumis sativus
Cucsa.339180 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 1889303-1891302 Cucumis sativus
Cucsa.339180 5.0kb upstream 5.0kb upstream 6613 true scaffold03356: 1882690-1889302 Cucumis sativus
Cucsa.339180 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 1882690-1887689 Cucumis sativus
Cucsa.339180 5.0kb downstream 5.0kb downstream 6613 true scaffold03356: 1887690-1894302 Cucumis sativus
Cucsa.339180 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 1889303-1894302 Cucumis sativus
Cucsa.339180 10.0kb upstream 10.0kb upstream 11613 true scaffold03356: 1877690-1889302 Cucumis sativus
Cucsa.339180 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 1877690-1887689 Cucumis sativus
Cucsa.339180 10.0kb downstream 10.0kb downstream 11613 true scaffold03356: 1887690-1899302 Cucumis sativus
Cucsa.339180 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 1889303-1899302 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605588 5273 Angiosperm Singleton cluster - no MSA
122235854 5265 Fabidae Singleton cluster - no MSA
123982067 5270 Rosid Singleton cluster - no MSA
123557742 5271 Pentapetalae Singleton cluster - no MSA
122592556 5272 Eudicot Singleton cluster - no MSA
120877878 5274 Embryophyte Singleton cluster - no MSA
122918767 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain