Gene : Cucsa.338760 C. sativus v1.0
Defline:  (1 of 4) 2.4.1.21 - Starch synthase / Starch (bacterial glycogen) synthase Genomic Order:  194
Name:  ? Cucsa.338760 Secondary Identifier:  ? PAC:16978795
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYCOGENSYNTH-PWY Cucumis sativus pathologic  
Csativus PWY-622 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.338760 0.5kb upstream 0.5kb upstream 8935 true scaffold03356: 1512899-1521833 Cucumis sativus
Cucsa.338760 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 1521334-1521833 Cucumis sativus
Cucsa.338760 0.5kb downstream 0.5kb downstream 8935 true scaffold03356: 1512399-1521333 Cucumis sativus
Cucsa.338760 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 1512399-1512898 Cucumis sativus
Cucsa.338760 1.0kb upstream 1.0kb upstream 9435 true scaffold03356: 1512899-1522333 Cucumis sativus
Cucsa.338760 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 1521334-1522333 Cucumis sativus
Cucsa.338760 1.0kb downstream 1.0kb downstream 9435 true scaffold03356: 1511899-1521333 Cucumis sativus
Cucsa.338760 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 1511899-1512898 Cucumis sativus
Cucsa.338760 2.0kb upstream 2.0kb upstream 10435 true scaffold03356: 1512899-1523333 Cucumis sativus
Cucsa.338760 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 1521334-1523333 Cucumis sativus
Cucsa.338760 2.0kb downstream 2.0kb downstream 10435 true scaffold03356: 1510899-1521333 Cucumis sativus
Cucsa.338760 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 1510899-1512898 Cucumis sativus
Cucsa.338760 5.0kb upstream 5.0kb upstream 13435 true scaffold03356: 1512899-1526333 Cucumis sativus
Cucsa.338760 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 1521334-1526333 Cucumis sativus
Cucsa.338760 5.0kb downstream 5.0kb downstream 13435 true scaffold03356: 1507899-1521333 Cucumis sativus
Cucsa.338760 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 1507899-1512898 Cucumis sativus
Cucsa.338760 10.0kb upstream 10.0kb upstream 18435 true scaffold03356: 1512899-1531333 Cucumis sativus
Cucsa.338760 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 1521334-1531333 Cucumis sativus
Cucsa.338760 10.0kb downstream 10.0kb downstream 18435 true scaffold03356: 1502899-1521333 Cucumis sativus
Cucsa.338760 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 1502899-1512898 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301456 5265 Fabidae View MSA
124066587 5270 Rosid View MSA
123744003 5271 Pentapetalae View MSA
122787814 5272 Eudicot View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain