Gene : Cucsa.337840 C. sativus v1.0
Defline:  (1 of 2) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  102
Name:  ? Cucsa.337840 Secondary Identifier:  ? PAC:16978673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.337840 0.5kb upstream 0.5kb upstream 2989 true scaffold03356: 862775-865763 Cucumis sativus
Cucsa.337840 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 865264-865763 Cucumis sativus
Cucsa.337840 0.5kb downstream 0.5kb downstream 2989 true scaffold03356: 862275-865263 Cucumis sativus
Cucsa.337840 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 862275-862774 Cucumis sativus
Cucsa.337840 1.0kb upstream 1.0kb upstream 3489 true scaffold03356: 862775-866263 Cucumis sativus
Cucsa.337840 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 865264-866263 Cucumis sativus
Cucsa.337840 1.0kb downstream 1.0kb downstream 3489 true scaffold03356: 861775-865263 Cucumis sativus
Cucsa.337840 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 861775-862774 Cucumis sativus
Cucsa.337840 2.0kb upstream 2.0kb upstream 4489 true scaffold03356: 862775-867263 Cucumis sativus
Cucsa.337840 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 865264-867263 Cucumis sativus
Cucsa.337840 2.0kb downstream 2.0kb downstream 4489 true scaffold03356: 860775-865263 Cucumis sativus
Cucsa.337840 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 860775-862774 Cucumis sativus
Cucsa.337840 5.0kb upstream 5.0kb upstream 7489 true scaffold03356: 862775-870263 Cucumis sativus
Cucsa.337840 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 865264-870263 Cucumis sativus
Cucsa.337840 5.0kb downstream 5.0kb downstream 7489 true scaffold03356: 857775-865263 Cucumis sativus
Cucsa.337840 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 857775-862774 Cucumis sativus
Cucsa.337840 10.0kb upstream 10.0kb upstream 12489 true scaffold03356: 862775-875263 Cucumis sativus
Cucsa.337840 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 865264-875263 Cucumis sativus
Cucsa.337840 10.0kb downstream 10.0kb downstream 12489 true scaffold03356: 852775-865263 Cucumis sativus
Cucsa.337840 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 852775-862774 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303918 5265 Fabidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain