Gene : Cucsa.336860 C. sativus v1.0
Defline:  (1 of 1) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  4
Name:  ? Cucsa.336860 Secondary Identifier:  ? PAC:16978512
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5980 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.336860 0.5kb upstream 0.5kb upstream 8483 true scaffold03356: 38138-46620 Cucumis sativus
Cucsa.336860 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 38138-38637 Cucumis sativus
Cucsa.336860 0.5kb downstream 0.5kb downstream 8483 true scaffold03356: 38638-47120 Cucumis sativus
Cucsa.336860 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 46621-47120 Cucumis sativus
Cucsa.336860 1.0kb upstream 1.0kb upstream 8983 true scaffold03356: 37638-46620 Cucumis sativus
Cucsa.336860 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 37638-38637 Cucumis sativus
Cucsa.336860 1.0kb downstream 1.0kb downstream 8983 true scaffold03356: 38638-47620 Cucumis sativus
Cucsa.336860 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 46621-47620 Cucumis sativus
Cucsa.336860 2.0kb upstream 2.0kb upstream 9983 true scaffold03356: 36638-46620 Cucumis sativus
Cucsa.336860 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 36638-38637 Cucumis sativus
Cucsa.336860 2.0kb downstream 2.0kb downstream 9983 true scaffold03356: 38638-48620 Cucumis sativus
Cucsa.336860 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 46621-48620 Cucumis sativus
Cucsa.336860 5.0kb upstream 5.0kb upstream 12983 true scaffold03356: 33638-46620 Cucumis sativus
Cucsa.336860 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 33638-38637 Cucumis sativus
Cucsa.336860 5.0kb downstream 5.0kb downstream 12983 true scaffold03356: 38638-51620 Cucumis sativus
Cucsa.336860 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 46621-51620 Cucumis sativus
Cucsa.336860 10.0kb upstream 10.0kb upstream 17983 true scaffold03356: 28638-46620 Cucumis sativus
Cucsa.336860 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 28638-38637 Cucumis sativus
Cucsa.336860 10.0kb downstream 10.0kb downstream 17983 true scaffold03356: 38638-56620 Cucumis sativus
Cucsa.336860 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 46621-56620 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301362 5265 Fabidae View MSA
124062411 5270 Rosid View MSA
123741166 5271 Pentapetalae View MSA
122787987 5272 Eudicot View MSA
122046207 5273 Angiosperm View MSA
121347306 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain