Gene : Cucsa.336870 C. sativus v1.0
Defline:  (1 of 3) PF10559 - Plug domain of Sec61p (Plug_translocon) Genomic Order:  5
Name:  ? Cucsa.336870 Secondary Identifier:  ? PAC:16978513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.336870 0.5kb upstream 0.5kb upstream 4329 true scaffold03356: 46948-51276 Cucumis sativus
Cucsa.336870 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 46948-47447 Cucumis sativus
Cucsa.336870 0.5kb downstream 0.5kb downstream 4329 true scaffold03356: 47448-51776 Cucumis sativus
Cucsa.336870 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 51277-51776 Cucumis sativus
Cucsa.336870 1.0kb upstream 1.0kb upstream 4829 true scaffold03356: 46448-51276 Cucumis sativus
Cucsa.336870 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 46448-47447 Cucumis sativus
Cucsa.336870 1.0kb downstream 1.0kb downstream 4829 true scaffold03356: 47448-52276 Cucumis sativus
Cucsa.336870 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 51277-52276 Cucumis sativus
Cucsa.336870 2.0kb upstream 2.0kb upstream 5829 true scaffold03356: 45448-51276 Cucumis sativus
Cucsa.336870 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 45448-47447 Cucumis sativus
Cucsa.336870 2.0kb downstream 2.0kb downstream 5829 true scaffold03356: 47448-53276 Cucumis sativus
Cucsa.336870 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 51277-53276 Cucumis sativus
Cucsa.336870 5.0kb upstream 5.0kb upstream 8829 true scaffold03356: 42448-51276 Cucumis sativus
Cucsa.336870 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 42448-47447 Cucumis sativus
Cucsa.336870 5.0kb downstream 5.0kb downstream 8829 true scaffold03356: 47448-56276 Cucumis sativus
Cucsa.336870 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 51277-56276 Cucumis sativus
Cucsa.336870 10.0kb upstream 10.0kb upstream 13829 true scaffold03356: 37448-51276 Cucumis sativus
Cucsa.336870 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 37448-47447 Cucumis sativus
Cucsa.336870 10.0kb downstream 10.0kb downstream 13829 true scaffold03356: 47448-61276 Cucumis sativus
Cucsa.336870 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 51277-61276 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303091 5265 Fabidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain