Gene : Cucsa.341480 C. sativus v1.0
Defline:  (1 of 10) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  461
Name:  ? Cucsa.341480 Secondary Identifier:  ? PAC:16979230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.341480 0.5kb upstream 0.5kb upstream 4246 true scaffold03356: 3863704-3867949 Cucumis sativus
Cucsa.341480 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 3867450-3867949 Cucumis sativus
Cucsa.341480 0.5kb downstream 0.5kb downstream 4246 true scaffold03356: 3863204-3867449 Cucumis sativus
Cucsa.341480 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 3863204-3863703 Cucumis sativus
Cucsa.341480 1.0kb upstream 1.0kb upstream 4746 true scaffold03356: 3863704-3868449 Cucumis sativus
Cucsa.341480 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 3867450-3868449 Cucumis sativus
Cucsa.341480 1.0kb downstream 1.0kb downstream 4746 true scaffold03356: 3862704-3867449 Cucumis sativus
Cucsa.341480 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 3862704-3863703 Cucumis sativus
Cucsa.341480 2.0kb upstream 2.0kb upstream 5746 true scaffold03356: 3863704-3869449 Cucumis sativus
Cucsa.341480 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 3867450-3869449 Cucumis sativus
Cucsa.341480 2.0kb downstream 2.0kb downstream 5746 true scaffold03356: 3861704-3867449 Cucumis sativus
Cucsa.341480 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 3861704-3863703 Cucumis sativus
Cucsa.341480 5.0kb upstream 5.0kb upstream 8746 true scaffold03356: 3863704-3872449 Cucumis sativus
Cucsa.341480 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 3867450-3872449 Cucumis sativus
Cucsa.341480 5.0kb downstream 5.0kb downstream 8746 true scaffold03356: 3858704-3867449 Cucumis sativus
Cucsa.341480 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 3858704-3863703 Cucumis sativus
Cucsa.341480 10.0kb upstream 10.0kb upstream 13746 true scaffold03356: 3863704-3877449 Cucumis sativus
Cucsa.341480 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 3867450-3877449 Cucumis sativus
Cucsa.341480 10.0kb downstream 10.0kb downstream 13746 true scaffold03356: 3853704-3867449 Cucumis sativus
Cucsa.341480 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 3853704-3863703 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314324 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain