Gene : Cucsa.321700 C. sativus v1.0
Defline:  (1 of 9) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  161
Name:  ? Cucsa.321700 Secondary Identifier:  ? PAC:16977560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.321700 0.5kb upstream 0.5kb upstream 2498 true scaffold03080: 1542118-1544615 Cucumis sativus
Cucsa.321700 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 1544116-1544615 Cucumis sativus
Cucsa.321700 0.5kb downstream 0.5kb downstream 2498 true scaffold03080: 1541618-1544115 Cucumis sativus
Cucsa.321700 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 1541618-1542117 Cucumis sativus
Cucsa.321700 1.0kb upstream 1.0kb upstream 2998 true scaffold03080: 1542118-1545115 Cucumis sativus
Cucsa.321700 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 1544116-1545115 Cucumis sativus
Cucsa.321700 1.0kb downstream 1.0kb downstream 2998 true scaffold03080: 1541118-1544115 Cucumis sativus
Cucsa.321700 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 1541118-1542117 Cucumis sativus
Cucsa.321700 2.0kb upstream 2.0kb upstream 3998 true scaffold03080: 1542118-1546115 Cucumis sativus
Cucsa.321700 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 1544116-1546115 Cucumis sativus
Cucsa.321700 2.0kb downstream 2.0kb downstream 3998 true scaffold03080: 1540118-1544115 Cucumis sativus
Cucsa.321700 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 1540118-1542117 Cucumis sativus
Cucsa.321700 5.0kb upstream 5.0kb upstream 6998 true scaffold03080: 1542118-1549115 Cucumis sativus
Cucsa.321700 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 1544116-1549115 Cucumis sativus
Cucsa.321700 5.0kb downstream 5.0kb downstream 6998 true scaffold03080: 1537118-1544115 Cucumis sativus
Cucsa.321700 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 1537118-1542117 Cucumis sativus
Cucsa.321700 10.0kb upstream 10.0kb upstream 11998 true scaffold03080: 1542118-1554115 Cucumis sativus
Cucsa.321700 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 1544116-1554115 Cucumis sativus
Cucsa.321700 10.0kb downstream 10.0kb downstream 11998 true scaffold03080: 1532118-1544115 Cucumis sativus
Cucsa.321700 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 1532118-1542117 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304299 5265 Fabidae View MSA
124065827 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain