Gene : Cucsa.321780 C. sativus v1.0
Defline:  (1 of 2) PTHR31500:SF17 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  169
Name:  ? Cucsa.321780 Secondary Identifier:  ? PAC:16977569
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.321780 0.5kb upstream 0.5kb upstream 9961 true scaffold03080: 1610771-1620731 Cucumis sativus
Cucsa.321780 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 1620232-1620731 Cucumis sativus
Cucsa.321780 0.5kb downstream 0.5kb downstream 9961 true scaffold03080: 1610271-1620231 Cucumis sativus
Cucsa.321780 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 1610271-1610770 Cucumis sativus
Cucsa.321780 1.0kb upstream 1.0kb upstream 10461 true scaffold03080: 1610771-1621231 Cucumis sativus
Cucsa.321780 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 1620232-1621231 Cucumis sativus
Cucsa.321780 1.0kb downstream 1.0kb downstream 10461 true scaffold03080: 1609771-1620231 Cucumis sativus
Cucsa.321780 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 1609771-1610770 Cucumis sativus
Cucsa.321780 2.0kb upstream 2.0kb upstream 11461 true scaffold03080: 1610771-1622231 Cucumis sativus
Cucsa.321780 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 1620232-1622231 Cucumis sativus
Cucsa.321780 2.0kb downstream 2.0kb downstream 11461 true scaffold03080: 1608771-1620231 Cucumis sativus
Cucsa.321780 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 1608771-1610770 Cucumis sativus
Cucsa.321780 5.0kb upstream 5.0kb upstream 14461 true scaffold03080: 1610771-1625231 Cucumis sativus
Cucsa.321780 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 1620232-1625231 Cucumis sativus
Cucsa.321780 5.0kb downstream 5.0kb downstream 14461 true scaffold03080: 1605771-1620231 Cucumis sativus
Cucsa.321780 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 1605771-1610770 Cucumis sativus
Cucsa.321780 10.0kb upstream 10.0kb upstream 19461 true scaffold03080: 1610771-1630231 Cucumis sativus
Cucsa.321780 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 1620232-1630231 Cucumis sativus
Cucsa.321780 10.0kb downstream 10.0kb downstream 19461 true scaffold03080: 1600771-1620231 Cucumis sativus
Cucsa.321780 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 1600771-1610770 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305600 5265 Fabidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain