Gene : Cucsa.321740 C. sativus v1.0
Defline:  (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  165
Name:  ? Cucsa.321740 Secondary Identifier:  ? PAC:16977564
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.321740 0.5kb upstream 0.5kb upstream 2620 true scaffold03080: 1558091-1560710 Cucumis sativus
Cucsa.321740 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 1558091-1558590 Cucumis sativus
Cucsa.321740 0.5kb downstream 0.5kb downstream 2620 true scaffold03080: 1558591-1561210 Cucumis sativus
Cucsa.321740 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 1560711-1561210 Cucumis sativus
Cucsa.321740 1.0kb upstream 1.0kb upstream 3120 true scaffold03080: 1557591-1560710 Cucumis sativus
Cucsa.321740 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 1557591-1558590 Cucumis sativus
Cucsa.321740 1.0kb downstream 1.0kb downstream 3120 true scaffold03080: 1558591-1561710 Cucumis sativus
Cucsa.321740 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 1560711-1561710 Cucumis sativus
Cucsa.321740 2.0kb upstream 2.0kb upstream 4120 true scaffold03080: 1556591-1560710 Cucumis sativus
Cucsa.321740 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 1556591-1558590 Cucumis sativus
Cucsa.321740 2.0kb downstream 2.0kb downstream 4120 true scaffold03080: 1558591-1562710 Cucumis sativus
Cucsa.321740 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 1560711-1562710 Cucumis sativus
Cucsa.321740 5.0kb upstream 5.0kb upstream 7120 true scaffold03080: 1553591-1560710 Cucumis sativus
Cucsa.321740 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 1553591-1558590 Cucumis sativus
Cucsa.321740 5.0kb downstream 5.0kb downstream 7120 true scaffold03080: 1558591-1565710 Cucumis sativus
Cucsa.321740 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 1560711-1565710 Cucumis sativus
Cucsa.321740 10.0kb upstream 10.0kb upstream 12120 true scaffold03080: 1548591-1560710 Cucumis sativus
Cucsa.321740 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 1548591-1558590 Cucumis sativus
Cucsa.321740 10.0kb downstream 10.0kb downstream 12120 true scaffold03080: 1558591-1570710 Cucumis sativus
Cucsa.321740 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 1560711-1570710 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605421 5273 Angiosperm Singleton cluster - no MSA
122235686 5265 Fabidae Singleton cluster - no MSA
123981900 5270 Rosid Singleton cluster - no MSA
123557575 5271 Pentapetalae Singleton cluster - no MSA
122592389 5272 Eudicot Singleton cluster - no MSA
120877711 5274 Embryophyte Singleton cluster - no MSA
122918600 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain