Gene : Cucsa.321590 C. sativus v1.0
Defline:  (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT Genomic Order:  150
Name:  ? Cucsa.321590 Secondary Identifier:  ? PAC:16977529
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.321590 0.5kb upstream 0.5kb upstream 9333 true scaffold03080: 1383688-1393020 Cucumis sativus
Cucsa.321590 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 1392521-1393020 Cucumis sativus
Cucsa.321590 0.5kb downstream 0.5kb downstream 9333 true scaffold03080: 1383188-1392520 Cucumis sativus
Cucsa.321590 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 1383188-1383687 Cucumis sativus
Cucsa.321590 1.0kb upstream 1.0kb upstream 9833 true scaffold03080: 1383688-1393520 Cucumis sativus
Cucsa.321590 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 1392521-1393520 Cucumis sativus
Cucsa.321590 1.0kb downstream 1.0kb downstream 9833 true scaffold03080: 1382688-1392520 Cucumis sativus
Cucsa.321590 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 1382688-1383687 Cucumis sativus
Cucsa.321590 2.0kb upstream 2.0kb upstream 10833 true scaffold03080: 1383688-1394520 Cucumis sativus
Cucsa.321590 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 1392521-1394520 Cucumis sativus
Cucsa.321590 2.0kb downstream 2.0kb downstream 10833 true scaffold03080: 1381688-1392520 Cucumis sativus
Cucsa.321590 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 1381688-1383687 Cucumis sativus
Cucsa.321590 5.0kb upstream 5.0kb upstream 13833 true scaffold03080: 1383688-1397520 Cucumis sativus
Cucsa.321590 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 1392521-1397520 Cucumis sativus
Cucsa.321590 5.0kb downstream 5.0kb downstream 13833 true scaffold03080: 1378688-1392520 Cucumis sativus
Cucsa.321590 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 1378688-1383687 Cucumis sativus
Cucsa.321590 10.0kb upstream 10.0kb upstream 18833 true scaffold03080: 1383688-1402520 Cucumis sativus
Cucsa.321590 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 1392521-1402520 Cucumis sativus
Cucsa.321590 10.0kb downstream 10.0kb downstream 18833 true scaffold03080: 1373688-1392520 Cucumis sativus
Cucsa.321590 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 1373688-1383687 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040985 5273 Angiosperm View MSA
122308788 5265 Fabidae View MSA
124067851 5270 Rosid View MSA
123744864 5271 Pentapetalae View MSA
122791100 5272 Eudicot View MSA
121346168 5274 Embryophyte View MSA
123424573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain