Gene : Cucsa.320170 C. sativus v1.0
Defline:  (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  9
Name:  ? Cucsa.320170 Secondary Identifier:  ? PAC:16977314
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5910 Cucumis sativus pathologic  
Csativus PWY-922 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.320170 0.5kb upstream 0.5kb upstream 5312 true scaffold03080: 74026-79337 Cucumis sativus
Cucsa.320170 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 74026-74525 Cucumis sativus
Cucsa.320170 0.5kb downstream 0.5kb downstream 5312 true scaffold03080: 74526-79837 Cucumis sativus
Cucsa.320170 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 79338-79837 Cucumis sativus
Cucsa.320170 1.0kb upstream 1.0kb upstream 5812 true scaffold03080: 73526-79337 Cucumis sativus
Cucsa.320170 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 73526-74525 Cucumis sativus
Cucsa.320170 1.0kb downstream 1.0kb downstream 5812 true scaffold03080: 74526-80337 Cucumis sativus
Cucsa.320170 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 79338-80337 Cucumis sativus
Cucsa.320170 2.0kb upstream 2.0kb upstream 6812 true scaffold03080: 72526-79337 Cucumis sativus
Cucsa.320170 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 72526-74525 Cucumis sativus
Cucsa.320170 2.0kb downstream 2.0kb downstream 6812 true scaffold03080: 74526-81337 Cucumis sativus
Cucsa.320170 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 79338-81337 Cucumis sativus
Cucsa.320170 5.0kb upstream 5.0kb upstream 9812 true scaffold03080: 69526-79337 Cucumis sativus
Cucsa.320170 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 69526-74525 Cucumis sativus
Cucsa.320170 5.0kb downstream 5.0kb downstream 9812 true scaffold03080: 74526-84337 Cucumis sativus
Cucsa.320170 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 79338-84337 Cucumis sativus
Cucsa.320170 10.0kb upstream 10.0kb upstream 14812 true scaffold03080: 64526-79337 Cucumis sativus
Cucsa.320170 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 64526-74525 Cucumis sativus
Cucsa.320170 10.0kb downstream 10.0kb downstream 14812 true scaffold03080: 74526-89337 Cucumis sativus
Cucsa.320170 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 79338-89337 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311073 5265 Fabidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain