Gene : Cucsa.362020 C. sativus v1.0
Defline:  (1 of 4) PF01117 - Aerolysin toxin (Aerolysin) Genomic Order:  2
Name:  ? Cucsa.362020 Secondary Identifier:  ? PAC:16980878
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.362020 0.5kb upstream 0.5kb upstream 3071 true scaffold03611: 20993-24063 Cucumis sativus
Cucsa.362020 0.5kb upstream 0.5kb upstream 500 false scaffold03611: 23564-24063 Cucumis sativus
Cucsa.362020 0.5kb downstream 0.5kb downstream 3071 true scaffold03611: 20493-23563 Cucumis sativus
Cucsa.362020 0.5kb downstream 0.5kb downstream 500 false scaffold03611: 20493-20992 Cucumis sativus
Cucsa.362020 1.0kb upstream 1.0kb upstream 3571 true scaffold03611: 20993-24563 Cucumis sativus
Cucsa.362020 1.0kb upstream 1.0kb upstream 1000 false scaffold03611: 23564-24563 Cucumis sativus
Cucsa.362020 1.0kb downstream 1.0kb downstream 3571 true scaffold03611: 19993-23563 Cucumis sativus
Cucsa.362020 1.0kb downstream 1.0kb downstream 1000 false scaffold03611: 19993-20992 Cucumis sativus
Cucsa.362020 2.0kb upstream 2.0kb upstream 4571 true scaffold03611: 20993-25563 Cucumis sativus
Cucsa.362020 2.0kb upstream 2.0kb upstream 2000 false scaffold03611: 23564-25563 Cucumis sativus
Cucsa.362020 2.0kb downstream 2.0kb downstream 4571 true scaffold03611: 18993-23563 Cucumis sativus
Cucsa.362020 2.0kb downstream 2.0kb downstream 2000 false scaffold03611: 18993-20992 Cucumis sativus
Cucsa.362020 5.0kb upstream 5.0kb upstream 7571 true scaffold03611: 20993-28563 Cucumis sativus
Cucsa.362020 5.0kb upstream 5.0kb upstream 5000 false scaffold03611: 23564-28563 Cucumis sativus
Cucsa.362020 5.0kb downstream 5.0kb downstream 7571 true scaffold03611: 15993-23563 Cucumis sativus
Cucsa.362020 5.0kb downstream 5.0kb downstream 5000 false scaffold03611: 15993-20992 Cucumis sativus
Cucsa.362020 10.0kb upstream 10.0kb upstream 12571 true scaffold03611: 20993-33563 Cucumis sativus
Cucsa.362020 10.0kb upstream 10.0kb upstream 10000 false scaffold03611: 23564-33563 Cucumis sativus
Cucsa.362020 10.0kb downstream 10.0kb downstream 12571 true scaffold03611: 10993-23563 Cucumis sativus
Cucsa.362020 10.0kb downstream 10.0kb downstream 10000 false scaffold03611: 10993-20992 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
122236927 5265 Fabidae View MSA
124072797 5270 Rosid View MSA
123745927 5271 Pentapetalae View MSA
122794125 5272 Eudicot View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain