Gene : Cucsa.365580 C. sativus v1.0
Defline:  (1 of 6) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  348
Name:  ? Cucsa.365580 Secondary Identifier:  ? PAC:16981440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.365580 0.5kb upstream 0.5kb upstream 6649 true scaffold03611: 3416364-3423012 Cucumis sativus
Cucsa.365580 0.5kb upstream 0.5kb upstream 500 false scaffold03611: 3422513-3423012 Cucumis sativus
Cucsa.365580 0.5kb downstream 0.5kb downstream 6649 true scaffold03611: 3415864-3422512 Cucumis sativus
Cucsa.365580 0.5kb downstream 0.5kb downstream 500 false scaffold03611: 3415864-3416363 Cucumis sativus
Cucsa.365580 1.0kb upstream 1.0kb upstream 7149 true scaffold03611: 3416364-3423512 Cucumis sativus
Cucsa.365580 1.0kb upstream 1.0kb upstream 1000 false scaffold03611: 3422513-3423512 Cucumis sativus
Cucsa.365580 1.0kb downstream 1.0kb downstream 7149 true scaffold03611: 3415364-3422512 Cucumis sativus
Cucsa.365580 1.0kb downstream 1.0kb downstream 1000 false scaffold03611: 3415364-3416363 Cucumis sativus
Cucsa.365580 2.0kb upstream 2.0kb upstream 8149 true scaffold03611: 3416364-3424512 Cucumis sativus
Cucsa.365580 2.0kb upstream 2.0kb upstream 2000 false scaffold03611: 3422513-3424512 Cucumis sativus
Cucsa.365580 2.0kb downstream 2.0kb downstream 8149 true scaffold03611: 3414364-3422512 Cucumis sativus
Cucsa.365580 2.0kb downstream 2.0kb downstream 2000 false scaffold03611: 3414364-3416363 Cucumis sativus
Cucsa.365580 5.0kb upstream 5.0kb upstream 11149 true scaffold03611: 3416364-3427512 Cucumis sativus
Cucsa.365580 5.0kb upstream 5.0kb upstream 5000 false scaffold03611: 3422513-3427512 Cucumis sativus
Cucsa.365580 5.0kb downstream 5.0kb downstream 11149 true scaffold03611: 3411364-3422512 Cucumis sativus
Cucsa.365580 5.0kb downstream 5.0kb downstream 5000 false scaffold03611: 3411364-3416363 Cucumis sativus
Cucsa.365580 10.0kb upstream 10.0kb upstream 16149 true scaffold03611: 3416364-3432512 Cucumis sativus
Cucsa.365580 10.0kb upstream 10.0kb upstream 10000 false scaffold03611: 3422513-3432512 Cucumis sativus
Cucsa.365580 10.0kb downstream 10.0kb downstream 16149 true scaffold03611: 3406364-3422512 Cucumis sativus
Cucsa.365580 10.0kb downstream 10.0kb downstream 10000 false scaffold03611: 3406364-3416363 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301501 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain