Gene : Cucsa.341060 C. sativus v1.0
Defline:  (1 of 1) PTHR11533//PTHR11533:SF177 - PROTEASE M1 ZINC METALLOPROTEASE Genomic Order:  421
Name:  ? Cucsa.341060 Secondary Identifier:  ? PAC:16979175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6842 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.341060 0.5kb upstream 0.5kb upstream 6812 true scaffold03356: 3432871-3439682 Cucumis sativus
Cucsa.341060 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 3439183-3439682 Cucumis sativus
Cucsa.341060 0.5kb downstream 0.5kb downstream 6812 true scaffold03356: 3432371-3439182 Cucumis sativus
Cucsa.341060 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 3432371-3432870 Cucumis sativus
Cucsa.341060 1.0kb upstream 1.0kb upstream 7312 true scaffold03356: 3432871-3440182 Cucumis sativus
Cucsa.341060 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 3439183-3440182 Cucumis sativus
Cucsa.341060 1.0kb downstream 1.0kb downstream 7312 true scaffold03356: 3431871-3439182 Cucumis sativus
Cucsa.341060 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 3431871-3432870 Cucumis sativus
Cucsa.341060 2.0kb upstream 2.0kb upstream 8312 true scaffold03356: 3432871-3441182 Cucumis sativus
Cucsa.341060 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 3439183-3441182 Cucumis sativus
Cucsa.341060 2.0kb downstream 2.0kb downstream 8312 true scaffold03356: 3430871-3439182 Cucumis sativus
Cucsa.341060 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 3430871-3432870 Cucumis sativus
Cucsa.341060 5.0kb upstream 5.0kb upstream 11312 true scaffold03356: 3432871-3444182 Cucumis sativus
Cucsa.341060 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 3439183-3444182 Cucumis sativus
Cucsa.341060 5.0kb downstream 5.0kb downstream 11312 true scaffold03356: 3427871-3439182 Cucumis sativus
Cucsa.341060 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 3427871-3432870 Cucumis sativus
Cucsa.341060 10.0kb upstream 10.0kb upstream 16312 true scaffold03356: 3432871-3449182 Cucumis sativus
Cucsa.341060 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 3439183-3449182 Cucumis sativus
Cucsa.341060 10.0kb downstream 10.0kb downstream 16312 true scaffold03356: 3422871-3439182 Cucumis sativus
Cucsa.341060 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 3422871-3432870 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311294 5265 Fabidae View MSA
124071503 5270 Rosid View MSA
123744499 5271 Pentapetalae View MSA
122771111 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain