Gene : Cucsa.340860 C. sativus v1.0
Defline:  (1 of 1) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  401
Name:  ? Cucsa.340860 Secondary Identifier:  ? PAC:16979130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.340860 0.5kb upstream 0.5kb upstream 8396 true scaffold03356: 3242427-3250822 Cucumis sativus
Cucsa.340860 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 3242427-3242926 Cucumis sativus
Cucsa.340860 0.5kb downstream 0.5kb downstream 8396 true scaffold03356: 3242927-3251322 Cucumis sativus
Cucsa.340860 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 3250823-3251322 Cucumis sativus
Cucsa.340860 1.0kb upstream 1.0kb upstream 8896 true scaffold03356: 3241927-3250822 Cucumis sativus
Cucsa.340860 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 3241927-3242926 Cucumis sativus
Cucsa.340860 1.0kb downstream 1.0kb downstream 8896 true scaffold03356: 3242927-3251822 Cucumis sativus
Cucsa.340860 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 3250823-3251822 Cucumis sativus
Cucsa.340860 2.0kb upstream 2.0kb upstream 9896 true scaffold03356: 3240927-3250822 Cucumis sativus
Cucsa.340860 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 3240927-3242926 Cucumis sativus
Cucsa.340860 2.0kb downstream 2.0kb downstream 9896 true scaffold03356: 3242927-3252822 Cucumis sativus
Cucsa.340860 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 3250823-3252822 Cucumis sativus
Cucsa.340860 5.0kb upstream 5.0kb upstream 12896 true scaffold03356: 3237927-3250822 Cucumis sativus
Cucsa.340860 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 3237927-3242926 Cucumis sativus
Cucsa.340860 5.0kb downstream 5.0kb downstream 12896 true scaffold03356: 3242927-3255822 Cucumis sativus
Cucsa.340860 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 3250823-3255822 Cucumis sativus
Cucsa.340860 10.0kb upstream 10.0kb upstream 17896 true scaffold03356: 3232927-3250822 Cucumis sativus
Cucsa.340860 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 3232927-3242926 Cucumis sativus
Cucsa.340860 10.0kb downstream 10.0kb downstream 17896 true scaffold03356: 3242927-3260822 Cucumis sativus
Cucsa.340860 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 3250823-3260822 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310988 5265 Fabidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain