Gene : Cucsa.340620 C. sativus v1.0
Defline:  (1 of 1) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  378
Name:  ? Cucsa.340620 Secondary Identifier:  ? PAC:16979081
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.340620 0.5kb upstream 0.5kb upstream 6641 true scaffold03356: 3024574-3031214 Cucumis sativus
Cucsa.340620 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 3030715-3031214 Cucumis sativus
Cucsa.340620 0.5kb downstream 0.5kb downstream 6641 true scaffold03356: 3024074-3030714 Cucumis sativus
Cucsa.340620 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 3024074-3024573 Cucumis sativus
Cucsa.340620 1.0kb upstream 1.0kb upstream 7141 true scaffold03356: 3024574-3031714 Cucumis sativus
Cucsa.340620 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 3030715-3031714 Cucumis sativus
Cucsa.340620 1.0kb downstream 1.0kb downstream 7141 true scaffold03356: 3023574-3030714 Cucumis sativus
Cucsa.340620 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 3023574-3024573 Cucumis sativus
Cucsa.340620 2.0kb upstream 2.0kb upstream 8141 true scaffold03356: 3024574-3032714 Cucumis sativus
Cucsa.340620 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 3030715-3032714 Cucumis sativus
Cucsa.340620 2.0kb downstream 2.0kb downstream 8141 true scaffold03356: 3022574-3030714 Cucumis sativus
Cucsa.340620 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 3022574-3024573 Cucumis sativus
Cucsa.340620 5.0kb upstream 5.0kb upstream 11141 true scaffold03356: 3024574-3035714 Cucumis sativus
Cucsa.340620 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 3030715-3035714 Cucumis sativus
Cucsa.340620 5.0kb downstream 5.0kb downstream 11141 true scaffold03356: 3019574-3030714 Cucumis sativus
Cucsa.340620 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 3019574-3024573 Cucumis sativus
Cucsa.340620 10.0kb upstream 10.0kb upstream 16141 true scaffold03356: 3024574-3040714 Cucumis sativus
Cucsa.340620 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 3030715-3040714 Cucumis sativus
Cucsa.340620 10.0kb downstream 10.0kb downstream 16141 true scaffold03356: 3014574-3030714 Cucumis sativus
Cucsa.340620 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 3014574-3024573 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308797 5265 Fabidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain