Gene : Cucsa.342550 C. sativus v1.0
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  563
Name:  ? Cucsa.342550 Secondary Identifier:  ? PAC:16979384
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ARGSYNBSUB-PWY Cucumis sativus pathologic  
Csativus ARGSYN-PWY Cucumis sativus pathologic  
Csativus CITRULBIO-PWY Cucumis sativus pathologic  
Csativus CITRULLINE-DEG-PWY Cucumis sativus pathologic  
Csativus PWY-4984 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.342550 0.5kb upstream 0.5kb upstream 4634 true scaffold03356: 4836682-4841315 Cucumis sativus
Cucsa.342550 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 4840816-4841315 Cucumis sativus
Cucsa.342550 0.5kb downstream 0.5kb downstream 4634 true scaffold03356: 4836182-4840815 Cucumis sativus
Cucsa.342550 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 4836182-4836681 Cucumis sativus
Cucsa.342550 1.0kb upstream 1.0kb upstream 5134 true scaffold03356: 4836682-4841815 Cucumis sativus
Cucsa.342550 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 4840816-4841815 Cucumis sativus
Cucsa.342550 1.0kb downstream 1.0kb downstream 5134 true scaffold03356: 4835682-4840815 Cucumis sativus
Cucsa.342550 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 4835682-4836681 Cucumis sativus
Cucsa.342550 2.0kb upstream 2.0kb upstream 6134 true scaffold03356: 4836682-4842815 Cucumis sativus
Cucsa.342550 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 4840816-4842815 Cucumis sativus
Cucsa.342550 2.0kb downstream 2.0kb downstream 6134 true scaffold03356: 4834682-4840815 Cucumis sativus
Cucsa.342550 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 4834682-4836681 Cucumis sativus
Cucsa.342550 5.0kb upstream 5.0kb upstream 9134 true scaffold03356: 4836682-4845815 Cucumis sativus
Cucsa.342550 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 4840816-4845815 Cucumis sativus
Cucsa.342550 5.0kb downstream 5.0kb downstream 9134 true scaffold03356: 4831682-4840815 Cucumis sativus
Cucsa.342550 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 4831682-4836681 Cucumis sativus
Cucsa.342550 10.0kb upstream 10.0kb upstream 14134 true scaffold03356: 4836682-4850815 Cucumis sativus
Cucsa.342550 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 4840816-4850815 Cucumis sativus
Cucsa.342550 10.0kb downstream 10.0kb downstream 14134 true scaffold03356: 4826682-4840815 Cucumis sativus
Cucsa.342550 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 4826682-4836681 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306877 5265 Fabidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain