Gene : Cucsa.342560 C. sativus v1.0
Defline:  (1 of 1) PTHR22572:SF110 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 2, CHLOROPLASTIC Genomic Order:  565
Name:  ? Cucsa.342560 Secondary Identifier:  ? PAC:16979385
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYCOGENSYNTH-PWY Cucumis sativus pathologic  
Csativus PWY-622 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.342560 0.5kb upstream 0.5kb upstream 5363 true scaffold03356: 4847724-4853086 Cucumis sativus
Cucsa.342560 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 4852587-4853086 Cucumis sativus
Cucsa.342560 0.5kb downstream 0.5kb downstream 5363 true scaffold03356: 4847224-4852586 Cucumis sativus
Cucsa.342560 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 4847224-4847723 Cucumis sativus
Cucsa.342560 1.0kb upstream 1.0kb upstream 5863 true scaffold03356: 4847724-4853586 Cucumis sativus
Cucsa.342560 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 4852587-4853586 Cucumis sativus
Cucsa.342560 1.0kb downstream 1.0kb downstream 5863 true scaffold03356: 4846724-4852586 Cucumis sativus
Cucsa.342560 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 4846724-4847723 Cucumis sativus
Cucsa.342560 2.0kb upstream 2.0kb upstream 6863 true scaffold03356: 4847724-4854586 Cucumis sativus
Cucsa.342560 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 4852587-4854586 Cucumis sativus
Cucsa.342560 2.0kb downstream 2.0kb downstream 6863 true scaffold03356: 4845724-4852586 Cucumis sativus
Cucsa.342560 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 4845724-4847723 Cucumis sativus
Cucsa.342560 5.0kb upstream 5.0kb upstream 9863 true scaffold03356: 4847724-4857586 Cucumis sativus
Cucsa.342560 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 4852587-4857586 Cucumis sativus
Cucsa.342560 5.0kb downstream 5.0kb downstream 9863 true scaffold03356: 4842724-4852586 Cucumis sativus
Cucsa.342560 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 4842724-4847723 Cucumis sativus
Cucsa.342560 10.0kb upstream 10.0kb upstream 14863 true scaffold03356: 4847724-4862586 Cucumis sativus
Cucsa.342560 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 4852587-4862586 Cucumis sativus
Cucsa.342560 10.0kb downstream 10.0kb downstream 14863 true scaffold03356: 4837724-4852586 Cucumis sativus
Cucsa.342560 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 4837724-4847723 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302213 5265 Fabidae View MSA
124063067 5270 Rosid View MSA
123736648 5271 Pentapetalae View MSA
122795851 5272 Eudicot View MSA
122049948 5273 Angiosperm View MSA
121348030 5274 Embryophyte View MSA
123424085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain