Gene : Cucsa.394660 C. sativus v1.0
Defline:  (1 of 2) PTHR34790:SF1 - PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC Genomic Order:  84
Name:  ? Cucsa.394660 Secondary Identifier:  ? PAC:16983238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394660 0.5kb upstream 0.5kb upstream 1975 true scaffold04100: 501441-503415 Cucumis sativus
Cucsa.394660 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 501441-501940 Cucumis sativus
Cucsa.394660 0.5kb downstream 0.5kb downstream 1975 true scaffold04100: 501941-503915 Cucumis sativus
Cucsa.394660 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 503416-503915 Cucumis sativus
Cucsa.394660 1.0kb upstream 1.0kb upstream 2475 true scaffold04100: 500941-503415 Cucumis sativus
Cucsa.394660 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 500941-501940 Cucumis sativus
Cucsa.394660 1.0kb downstream 1.0kb downstream 2475 true scaffold04100: 501941-504415 Cucumis sativus
Cucsa.394660 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 503416-504415 Cucumis sativus
Cucsa.394660 2.0kb upstream 2.0kb upstream 3475 true scaffold04100: 499941-503415 Cucumis sativus
Cucsa.394660 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 499941-501940 Cucumis sativus
Cucsa.394660 2.0kb downstream 2.0kb downstream 3475 true scaffold04100: 501941-505415 Cucumis sativus
Cucsa.394660 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 503416-505415 Cucumis sativus
Cucsa.394660 5.0kb upstream 5.0kb upstream 6475 true scaffold04100: 496941-503415 Cucumis sativus
Cucsa.394660 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 496941-501940 Cucumis sativus
Cucsa.394660 5.0kb downstream 5.0kb downstream 6475 true scaffold04100: 501941-508415 Cucumis sativus
Cucsa.394660 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 503416-508415 Cucumis sativus
Cucsa.394660 10.0kb upstream 10.0kb upstream 11475 true scaffold04100: 491941-503415 Cucumis sativus
Cucsa.394660 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 491941-501940 Cucumis sativus
Cucsa.394660 10.0kb downstream 10.0kb downstream 11475 true scaffold04100: 501941-513415 Cucumis sativus
Cucsa.394660 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 503416-513415 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300647 5265 Fabidae View MSA
124068149 5270 Rosid View MSA
123737018 5271 Pentapetalae View MSA
122795977 5272 Eudicot View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain