Gene : Cucsa.394810 C. sativus v1.0
Defline:  (1 of 3) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  99
Name:  ? Cucsa.394810 Secondary Identifier:  ? PAC:16983256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394810 0.5kb upstream 0.5kb upstream 2885 true scaffold04100: 580309-583193 Cucumis sativus
Cucsa.394810 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 582694-583193 Cucumis sativus
Cucsa.394810 0.5kb downstream 0.5kb downstream 2885 true scaffold04100: 579809-582693 Cucumis sativus
Cucsa.394810 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 579809-580308 Cucumis sativus
Cucsa.394810 1.0kb upstream 1.0kb upstream 3385 true scaffold04100: 580309-583693 Cucumis sativus
Cucsa.394810 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 582694-583693 Cucumis sativus
Cucsa.394810 1.0kb downstream 1.0kb downstream 3385 true scaffold04100: 579309-582693 Cucumis sativus
Cucsa.394810 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 579309-580308 Cucumis sativus
Cucsa.394810 2.0kb upstream 2.0kb upstream 4385 true scaffold04100: 580309-584693 Cucumis sativus
Cucsa.394810 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 582694-584693 Cucumis sativus
Cucsa.394810 2.0kb downstream 2.0kb downstream 4385 true scaffold04100: 578309-582693 Cucumis sativus
Cucsa.394810 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 578309-580308 Cucumis sativus
Cucsa.394810 5.0kb upstream 5.0kb upstream 7385 true scaffold04100: 580309-587693 Cucumis sativus
Cucsa.394810 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 582694-587693 Cucumis sativus
Cucsa.394810 5.0kb downstream 5.0kb downstream 7385 true scaffold04100: 575309-582693 Cucumis sativus
Cucsa.394810 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 575309-580308 Cucumis sativus
Cucsa.394810 10.0kb upstream 10.0kb upstream 12385 true scaffold04100: 580309-592693 Cucumis sativus
Cucsa.394810 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 582694-592693 Cucumis sativus
Cucsa.394810 10.0kb downstream 10.0kb downstream 12385 true scaffold04100: 570309-582693 Cucumis sativus
Cucsa.394810 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 570309-580308 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307470 5265 Fabidae View MSA
124064584 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain