Gene : Cucsa.394390 C. sativus v1.0
Defline:  (1 of 3) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  56
Name:  ? Cucsa.394390 Secondary Identifier:  ? PAC:16983189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394390 0.5kb upstream 0.5kb upstream 10846 true scaffold04100: 349772-360617 Cucumis sativus
Cucsa.394390 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 349772-350271 Cucumis sativus
Cucsa.394390 0.5kb downstream 0.5kb downstream 10846 true scaffold04100: 350272-361117 Cucumis sativus
Cucsa.394390 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 360618-361117 Cucumis sativus
Cucsa.394390 1.0kb upstream 1.0kb upstream 11346 true scaffold04100: 349272-360617 Cucumis sativus
Cucsa.394390 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 349272-350271 Cucumis sativus
Cucsa.394390 1.0kb downstream 1.0kb downstream 11346 true scaffold04100: 350272-361617 Cucumis sativus
Cucsa.394390 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 360618-361617 Cucumis sativus
Cucsa.394390 2.0kb upstream 2.0kb upstream 12346 true scaffold04100: 348272-360617 Cucumis sativus
Cucsa.394390 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 348272-350271 Cucumis sativus
Cucsa.394390 2.0kb downstream 2.0kb downstream 12346 true scaffold04100: 350272-362617 Cucumis sativus
Cucsa.394390 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 360618-362617 Cucumis sativus
Cucsa.394390 5.0kb upstream 5.0kb upstream 15346 true scaffold04100: 345272-360617 Cucumis sativus
Cucsa.394390 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 345272-350271 Cucumis sativus
Cucsa.394390 5.0kb downstream 5.0kb downstream 15346 true scaffold04100: 350272-365617 Cucumis sativus
Cucsa.394390 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 360618-365617 Cucumis sativus
Cucsa.394390 10.0kb upstream 10.0kb upstream 20346 true scaffold04100: 340272-360617 Cucumis sativus
Cucsa.394390 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 340272-350271 Cucumis sativus
Cucsa.394390 10.0kb downstream 10.0kb downstream 20346 true scaffold04100: 350272-370617 Cucumis sativus
Cucsa.394390 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 360618-370617 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310769 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain