Gene : Cucsa.394180 C. sativus v1.0
Defline:  (1 of 1) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  35
Name:  ? Cucsa.394180 Secondary Identifier:  ? PAC:16983145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394180 0.5kb upstream 0.5kb upstream 3596 true scaffold04100: 231530-235125 Cucumis sativus
Cucsa.394180 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 234626-235125 Cucumis sativus
Cucsa.394180 0.5kb downstream 0.5kb downstream 3596 true scaffold04100: 231030-234625 Cucumis sativus
Cucsa.394180 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 231030-231529 Cucumis sativus
Cucsa.394180 1.0kb upstream 1.0kb upstream 4096 true scaffold04100: 231530-235625 Cucumis sativus
Cucsa.394180 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 234626-235625 Cucumis sativus
Cucsa.394180 1.0kb downstream 1.0kb downstream 4096 true scaffold04100: 230530-234625 Cucumis sativus
Cucsa.394180 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 230530-231529 Cucumis sativus
Cucsa.394180 2.0kb upstream 2.0kb upstream 5096 true scaffold04100: 231530-236625 Cucumis sativus
Cucsa.394180 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 234626-236625 Cucumis sativus
Cucsa.394180 2.0kb downstream 2.0kb downstream 5096 true scaffold04100: 229530-234625 Cucumis sativus
Cucsa.394180 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 229530-231529 Cucumis sativus
Cucsa.394180 5.0kb upstream 5.0kb upstream 8096 true scaffold04100: 231530-239625 Cucumis sativus
Cucsa.394180 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 234626-239625 Cucumis sativus
Cucsa.394180 5.0kb downstream 5.0kb downstream 8096 true scaffold04100: 226530-234625 Cucumis sativus
Cucsa.394180 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 226530-231529 Cucumis sativus
Cucsa.394180 10.0kb upstream 10.0kb upstream 13096 true scaffold04100: 231530-244625 Cucumis sativus
Cucsa.394180 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 234626-244625 Cucumis sativus
Cucsa.394180 10.0kb downstream 10.0kb downstream 13096 true scaffold04100: 221530-234625 Cucumis sativus
Cucsa.394180 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 221530-231529 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299341 5265 Fabidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain