Gene : Cucsa.393980 C. sativus v1.0
Defline:  (1 of 5) PF01466 - Skp1 family, dimerisation domain (Skp1) Genomic Order:  15
Name:  ? Cucsa.393980 Secondary Identifier:  ? PAC:16983120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.393980 0.5kb upstream 0.5kb upstream 6601 true scaffold04100: 77230-83830 Cucumis sativus
Cucsa.393980 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 83331-83830 Cucumis sativus
Cucsa.393980 0.5kb downstream 0.5kb downstream 6601 true scaffold04100: 76730-83330 Cucumis sativus
Cucsa.393980 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 76730-77229 Cucumis sativus
Cucsa.393980 1.0kb upstream 1.0kb upstream 7101 true scaffold04100: 77230-84330 Cucumis sativus
Cucsa.393980 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 83331-84330 Cucumis sativus
Cucsa.393980 1.0kb downstream 1.0kb downstream 7101 true scaffold04100: 76230-83330 Cucumis sativus
Cucsa.393980 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 76230-77229 Cucumis sativus
Cucsa.393980 2.0kb upstream 2.0kb upstream 8101 true scaffold04100: 77230-85330 Cucumis sativus
Cucsa.393980 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 83331-85330 Cucumis sativus
Cucsa.393980 2.0kb downstream 2.0kb downstream 8101 true scaffold04100: 75230-83330 Cucumis sativus
Cucsa.393980 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 75230-77229 Cucumis sativus
Cucsa.393980 5.0kb upstream 5.0kb upstream 11101 true scaffold04100: 77230-88330 Cucumis sativus
Cucsa.393980 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 83331-88330 Cucumis sativus
Cucsa.393980 5.0kb downstream 5.0kb downstream 11101 true scaffold04100: 72230-83330 Cucumis sativus
Cucsa.393980 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 72230-77229 Cucumis sativus
Cucsa.393980 10.0kb upstream 10.0kb upstream 16101 true scaffold04100: 77230-93330 Cucumis sativus
Cucsa.393980 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 83331-93330 Cucumis sativus
Cucsa.393980 10.0kb downstream 10.0kb downstream 16101 true scaffold04100: 67230-83330 Cucumis sativus
Cucsa.393980 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 67230-77229 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606297 5273 Angiosperm Singleton cluster - no MSA
122236567 5265 Fabidae Singleton cluster - no MSA
123982777 5270 Rosid Singleton cluster - no MSA
123558451 5271 Pentapetalae Singleton cluster - no MSA
122593265 5272 Eudicot Singleton cluster - no MSA
120878587 5274 Embryophyte Singleton cluster - no MSA
122919476 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain