Gene : Cucsa.394000 C. sativus v1.0
Defline:  (1 of 1) PTHR11079:SF73 - RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  17
Name:  ? Cucsa.394000 Secondary Identifier:  ? PAC:16983122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394000 0.5kb upstream 0.5kb upstream 3371 true scaffold04100: 100469-103839 Cucumis sativus
Cucsa.394000 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 100469-100968 Cucumis sativus
Cucsa.394000 0.5kb downstream 0.5kb downstream 3371 true scaffold04100: 100969-104339 Cucumis sativus
Cucsa.394000 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 103840-104339 Cucumis sativus
Cucsa.394000 1.0kb upstream 1.0kb upstream 3871 true scaffold04100: 99969-103839 Cucumis sativus
Cucsa.394000 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 99969-100968 Cucumis sativus
Cucsa.394000 1.0kb downstream 1.0kb downstream 3871 true scaffold04100: 100969-104839 Cucumis sativus
Cucsa.394000 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 103840-104839 Cucumis sativus
Cucsa.394000 2.0kb upstream 2.0kb upstream 4871 true scaffold04100: 98969-103839 Cucumis sativus
Cucsa.394000 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 98969-100968 Cucumis sativus
Cucsa.394000 2.0kb downstream 2.0kb downstream 4871 true scaffold04100: 100969-105839 Cucumis sativus
Cucsa.394000 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 103840-105839 Cucumis sativus
Cucsa.394000 5.0kb upstream 5.0kb upstream 7871 true scaffold04100: 95969-103839 Cucumis sativus
Cucsa.394000 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 95969-100968 Cucumis sativus
Cucsa.394000 5.0kb downstream 5.0kb downstream 7871 true scaffold04100: 100969-108839 Cucumis sativus
Cucsa.394000 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 103840-108839 Cucumis sativus
Cucsa.394000 10.0kb upstream 10.0kb upstream 12871 true scaffold04100: 90969-103839 Cucumis sativus
Cucsa.394000 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 90969-100968 Cucumis sativus
Cucsa.394000 10.0kb downstream 10.0kb downstream 12871 true scaffold04100: 100969-113839 Cucumis sativus
Cucsa.394000 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 103840-113839 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606298 5273 Angiosperm Singleton cluster - no MSA
122236568 5265 Fabidae Singleton cluster - no MSA
123982778 5270 Rosid Singleton cluster - no MSA
123558452 5271 Pentapetalae Singleton cluster - no MSA
122593266 5272 Eudicot Singleton cluster - no MSA
120878588 5274 Embryophyte Singleton cluster - no MSA
122919477 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain