Gene : Cucsa.004460 C. sativus v1.0
Defline:  (1 of 1) PTHR11370 - DNA-REPAIR PROTEIN XRCC1 Genomic Order:  4
Name:  ? Cucsa.004460 Secondary Identifier:  ? PAC:16951008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.004460 0.5kb upstream 0.5kb upstream 5278 true scaffold00053: 22723-28000 Cucumis sativus
Cucsa.004460 0.5kb upstream 0.5kb upstream 500 false scaffold00053: 22723-23222 Cucumis sativus
Cucsa.004460 0.5kb downstream 0.5kb downstream 5278 true scaffold00053: 23223-28500 Cucumis sativus
Cucsa.004460 0.5kb downstream 0.5kb downstream 500 false scaffold00053: 28001-28500 Cucumis sativus
Cucsa.004460 1.0kb upstream 1.0kb upstream 5778 true scaffold00053: 22223-28000 Cucumis sativus
Cucsa.004460 1.0kb upstream 1.0kb upstream 1000 false scaffold00053: 22223-23222 Cucumis sativus
Cucsa.004460 1.0kb downstream 1.0kb downstream 5778 true scaffold00053: 23223-29000 Cucumis sativus
Cucsa.004460 1.0kb downstream 1.0kb downstream 1000 false scaffold00053: 28001-29000 Cucumis sativus
Cucsa.004460 2.0kb upstream 2.0kb upstream 6778 true scaffold00053: 21223-28000 Cucumis sativus
Cucsa.004460 2.0kb upstream 2.0kb upstream 2000 false scaffold00053: 21223-23222 Cucumis sativus
Cucsa.004460 2.0kb downstream 2.0kb downstream 6778 true scaffold00053: 23223-30000 Cucumis sativus
Cucsa.004460 2.0kb downstream 2.0kb downstream 2000 false scaffold00053: 28001-30000 Cucumis sativus
Cucsa.004460 5.0kb upstream 5.0kb upstream 9778 true scaffold00053: 18223-28000 Cucumis sativus
Cucsa.004460 5.0kb upstream 5.0kb upstream 5000 false scaffold00053: 18223-23222 Cucumis sativus
Cucsa.004460 5.0kb downstream 5.0kb downstream 9778 true scaffold00053: 23223-33000 Cucumis sativus
Cucsa.004460 5.0kb downstream 5.0kb downstream 5000 false scaffold00053: 28001-33000 Cucumis sativus
Cucsa.004460 10.0kb upstream 10.0kb upstream 14778 true scaffold00053: 13223-28000 Cucumis sativus
Cucsa.004460 10.0kb upstream 10.0kb upstream 10000 false scaffold00053: 13223-23222 Cucumis sativus
Cucsa.004460 10.0kb downstream 10.0kb downstream 14778 true scaffold00053: 23223-38000 Cucumis sativus
Cucsa.004460 10.0kb downstream 10.0kb downstream 10000 false scaffold00053: 28001-38000 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302854 5265 Fabidae View MSA
124064277 5270 Rosid View MSA
123745081 5271 Pentapetalae View MSA
122790473 5272 Eudicot View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain