Gene : Cucsa.003950 C. sativus v1.0
Defline:  (1 of 1) PTHR11440:SF3 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4 Genomic Order:  13
Name:  ? Cucsa.003950 Secondary Identifier:  ? PAC:16950986
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus LIPASYN-PWY Cucumis sativus pathologic  
Csativus PWY-6803 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.003950 0.5kb upstream 0.5kb upstream 7521 true scaffold00046: 93775-101295 Cucumis sativus
Cucsa.003950 0.5kb upstream 0.5kb upstream 500 false scaffold00046: 100796-101295 Cucumis sativus
Cucsa.003950 0.5kb downstream 0.5kb downstream 7521 true scaffold00046: 93275-100795 Cucumis sativus
Cucsa.003950 0.5kb downstream 0.5kb downstream 500 false scaffold00046: 93275-93774 Cucumis sativus
Cucsa.003950 1.0kb upstream 1.0kb upstream 8021 true scaffold00046: 93775-101795 Cucumis sativus
Cucsa.003950 1.0kb upstream 1.0kb upstream 1000 false scaffold00046: 100796-101795 Cucumis sativus
Cucsa.003950 1.0kb downstream 1.0kb downstream 8021 true scaffold00046: 92775-100795 Cucumis sativus
Cucsa.003950 1.0kb downstream 1.0kb downstream 1000 false scaffold00046: 92775-93774 Cucumis sativus
Cucsa.003950 2.0kb upstream 2.0kb upstream 9021 true scaffold00046: 93775-102795 Cucumis sativus
Cucsa.003950 2.0kb upstream 2.0kb upstream 2000 false scaffold00046: 100796-102795 Cucumis sativus
Cucsa.003950 2.0kb downstream 2.0kb downstream 9021 true scaffold00046: 91775-100795 Cucumis sativus
Cucsa.003950 2.0kb downstream 2.0kb downstream 2000 false scaffold00046: 91775-93774 Cucumis sativus
Cucsa.003950 5.0kb upstream 5.0kb upstream 12021 true scaffold00046: 93775-105795 Cucumis sativus
Cucsa.003950 5.0kb upstream 5.0kb upstream 5000 false scaffold00046: 100796-105795 Cucumis sativus
Cucsa.003950 5.0kb downstream 5.0kb downstream 12021 true scaffold00046: 88775-100795 Cucumis sativus
Cucsa.003950 5.0kb downstream 5.0kb downstream 5000 false scaffold00046: 88775-93774 Cucumis sativus
Cucsa.003950 10.0kb upstream 10.0kb upstream 17021 true scaffold00046: 93775-110795 Cucumis sativus
Cucsa.003950 10.0kb upstream 10.0kb upstream 10000 false scaffold00046: 100796-110795 Cucumis sativus
Cucsa.003950 10.0kb downstream 10.0kb downstream 17021 true scaffold00046: 83775-100795 Cucumis sativus
Cucsa.003950 10.0kb downstream 10.0kb downstream 10000 false scaffold00046: 83775-93774 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041263 5273 Angiosperm View MSA
122300229 5265 Fabidae View MSA
124061879 5270 Rosid View MSA
123744948 5271 Pentapetalae View MSA
122787673 5272 Eudicot View MSA
121345850 5274 Embryophyte View MSA
123380278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain