Gene : Cucsa.002040 C. sativus v1.0
Defline:  (1 of 2) PTHR11254:SF281 - E3 UBIQUITIN-PROTEIN LIGASE UPL6 Genomic Order:  1
Name:  ? Cucsa.002040 Secondary Identifier:  ? PAC:16950899
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.002040 0.5kb upstream 0.5kb upstream 415 true scaffold00029: 1-415 Cucumis sativus
Cucsa.002040 0.5kb upstream 0.5kb upstream 75 false scaffold00029: 1-75 Cucumis sativus
Cucsa.002040 0.5kb downstream 0.5kb downstream 467 true scaffold00029: 76-542 Cucumis sativus
Cucsa.002040 0.5kb downstream 0.5kb downstream 127 false scaffold00029: 416-542 Cucumis sativus
Cucsa.002040 1.0kb upstream 1.0kb upstream 415 true scaffold00029: 1-415 Cucumis sativus
Cucsa.002040 1.0kb upstream 1.0kb upstream 75 false scaffold00029: 1-75 Cucumis sativus
Cucsa.002040 1.0kb downstream 1.0kb downstream 467 true scaffold00029: 76-542 Cucumis sativus
Cucsa.002040 1.0kb downstream 1.0kb downstream 127 false scaffold00029: 416-542 Cucumis sativus
Cucsa.002040 2.0kb upstream 2.0kb upstream 415 true scaffold00029: 1-415 Cucumis sativus
Cucsa.002040 2.0kb upstream 2.0kb upstream 75 false scaffold00029: 1-75 Cucumis sativus
Cucsa.002040 2.0kb downstream 2.0kb downstream 467 true scaffold00029: 76-542 Cucumis sativus
Cucsa.002040 2.0kb downstream 2.0kb downstream 127 false scaffold00029: 416-542 Cucumis sativus
Cucsa.002040 5.0kb upstream 5.0kb upstream 415 true scaffold00029: 1-415 Cucumis sativus
Cucsa.002040 5.0kb upstream 5.0kb upstream 75 false scaffold00029: 1-75 Cucumis sativus
Cucsa.002040 5.0kb downstream 5.0kb downstream 467 true scaffold00029: 76-542 Cucumis sativus
Cucsa.002040 5.0kb downstream 5.0kb downstream 127 false scaffold00029: 416-542 Cucumis sativus
Cucsa.002040 10.0kb upstream 10.0kb upstream 415 true scaffold00029: 1-415 Cucumis sativus
Cucsa.002040 10.0kb upstream 10.0kb upstream 75 false scaffold00029: 1-75 Cucumis sativus
Cucsa.002040 10.0kb downstream 10.0kb downstream 467 true scaffold00029: 76-542 Cucumis sativus
Cucsa.002040 10.0kb downstream 10.0kb downstream 127 false scaffold00029: 416-542 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121601385 5273 Angiosperm Singleton cluster - no MSA
122231618 5265 Fabidae Singleton cluster - no MSA
123977859 5270 Rosid Singleton cluster - no MSA
123553537 5271 Pentapetalae Singleton cluster - no MSA
122588351 5272 Eudicot Singleton cluster - no MSA
120873676 5274 Embryophyte Singleton cluster - no MSA
122914567 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain