Gene : Cucsa.398260 C. sativus v1.0
Defline:  (1 of 3) PTHR21327 - GTP CYCLOHYDROLASE II-RELATED Genomic Order:  64
Name:  ? Cucsa.398260 Secondary Identifier:  ? PAC:16983611
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus RIBOSYN2-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.398260 0.5kb upstream 0.5kb upstream 4074 true scaffold04158: 851135-855208 Cucumis sativus
Cucsa.398260 0.5kb upstream 0.5kb upstream 500 false scaffold04158: 851135-851634 Cucumis sativus
Cucsa.398260 0.5kb downstream 0.5kb downstream 4074 true scaffold04158: 851635-855708 Cucumis sativus
Cucsa.398260 0.5kb downstream 0.5kb downstream 500 false scaffold04158: 855209-855708 Cucumis sativus
Cucsa.398260 1.0kb upstream 1.0kb upstream 4574 true scaffold04158: 850635-855208 Cucumis sativus
Cucsa.398260 1.0kb upstream 1.0kb upstream 1000 false scaffold04158: 850635-851634 Cucumis sativus
Cucsa.398260 1.0kb downstream 1.0kb downstream 4574 true scaffold04158: 851635-856208 Cucumis sativus
Cucsa.398260 1.0kb downstream 1.0kb downstream 1000 false scaffold04158: 855209-856208 Cucumis sativus
Cucsa.398260 2.0kb upstream 2.0kb upstream 5574 true scaffold04158: 849635-855208 Cucumis sativus
Cucsa.398260 2.0kb upstream 2.0kb upstream 2000 false scaffold04158: 849635-851634 Cucumis sativus
Cucsa.398260 2.0kb downstream 2.0kb downstream 5574 true scaffold04158: 851635-857208 Cucumis sativus
Cucsa.398260 2.0kb downstream 2.0kb downstream 2000 false scaffold04158: 855209-857208 Cucumis sativus
Cucsa.398260 5.0kb upstream 5.0kb upstream 8574 true scaffold04158: 846635-855208 Cucumis sativus
Cucsa.398260 5.0kb upstream 5.0kb upstream 5000 false scaffold04158: 846635-851634 Cucumis sativus
Cucsa.398260 5.0kb downstream 5.0kb downstream 8574 true scaffold04158: 851635-860208 Cucumis sativus
Cucsa.398260 5.0kb downstream 5.0kb downstream 5000 false scaffold04158: 855209-860208 Cucumis sativus
Cucsa.398260 10.0kb upstream 10.0kb upstream 13574 true scaffold04158: 841635-855208 Cucumis sativus
Cucsa.398260 10.0kb upstream 10.0kb upstream 10000 false scaffold04158: 841635-851634 Cucumis sativus
Cucsa.398260 10.0kb downstream 10.0kb downstream 13574 true scaffold04158: 851635-865208 Cucumis sativus
Cucsa.398260 10.0kb downstream 10.0kb downstream 10000 false scaffold04158: 855209-865208 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606379 5273 Angiosperm Singleton cluster - no MSA
122236649 5265 Fabidae Singleton cluster - no MSA
123982859 5270 Rosid Singleton cluster - no MSA
123558533 5271 Pentapetalae Singleton cluster - no MSA
122593347 5272 Eudicot Singleton cluster - no MSA
120878669 5274 Embryophyte Singleton cluster - no MSA
122919558 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain